Research Results - Associated research group (FY2016 to 2017)
*Corresponding author, #These authors contributed equally to this work.
Underlines denote the study representative, and dotted underlines denote research team members
Underlines denote the study representative, and dotted underlines denote research team members
Arimura group
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-2017-
- Original papers
- Nemoto, K., Ramadan, A., Arimura, G., Imai, K., Tomii, K., Shinozaki, K., and *Sawasaki, T. (2017) Tyrosine phosphorylation of the GARU E3 ubiquitin ligase promotes gibberellin signalling by preventing GID1 degradation. Nature Commun., 8, 1004. (15 pages).
https://www.nature.com/articles/s41467-017-01005-5 - Ozawa, R., Endo, H., Iijima, M., Sugimoto, K., Takabayashi, J., Gotoh, T., and *Arimura, G. (2017) Intraspecific variation among Tetranychid mites for ability to detoxify and to induce plant defenses. Sci. Rep., 7, 43200 (11 pages).
https://www.nature.com/articles/srep43200 - Review papers
- *Yazaki, K., Arimura, G., and Ohnishi, T. (2017) 'Hidden' terpenoids in plants: their biosynthesis, localization and ecological roles. Plant Cell Physiol., 58, 1615-1621.
https://academic.oup.com/pcp/article/58/10/1615/4096626 - Books
- Arimura, G. and Pearse, I. (2017) From the lab bench to the forest: ecology and defence mechanisms of volatile-mediated "talking trees." In "Advances in Botanical Research vol. 82. Communication between Plants, and between Plants and Other Organisms" edited by Becard, G. Elsevier, Amsterdam, the Netherland, 3-17.
https://doi.org/10.1016/bs.abr.2016.08.001
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-2016-
- Books
- Arimura, G. and Maffei, M. E. (2016) Plant specialized metabolism: genomics, biochemistry, and biological functions. CRC Press, Boca Raton, FL, USA, 376.
- Arimura, G. and Maffei, M. E. (2016) Introduction to plant specialized metabolism. In "Plant Specialized Metabolism: Genomics, Biochemistry, and Biological Functions" edited by Arimrua, G. and Maffei, M.E. CRC Press, 1-7.
- Arimura, G., Matsui, K., Koeduka, T., and Holopainen, J. K. (2016) Biosynthesis and regulation of plant volatiles, and their functional roles in ecosystem interactions and global environmental changes. In "Plant Specialized Metabolism: Genomics, Biochemistry, and Biological Functions" edited by Arimrua, G. and Maffei, M.E. CRC Press, 185-237.
Ashikari group
-
-2017-
- Original papers
- Bessho-Uehara, K., Furuta, T., Masuda, K., Yamada, S., Angeles-Shim, R. B., Ashikari, M., and *Takashi, T. (2017) Construction of rice chromosome segment substitution lines harboring Oryza barthii genome and evaluation of yield-related traits. Breed. Sci., 67, 408-415.
https://www.jstage.jst.go.jp/article/jsbbs/67/4/67_17022/_html/ - Gamuyao, R., Nagai, K., Ayano, M., Mori, Y., Minami, A., Kojima, M., Suzuki, T., Sakakibara, H., Higashiyama, T., Ashikari, M., and *Reuscher, S. (2017) Hormone distribution and transcriptome profiles in bamboo shoots provide insights on bamboo stem emergence and growth. Plant Cell Physiol., 58, 702-716.
https://academic.oup.com/pcp/article/58/4/702/2993903
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-2016-
- Original papers
- Furuta, T., Bessho-Uehara, K., Angeles-Shim, R. B., Shim, J., Nagai, K., Ashikari, M., and *Takashi, T. (2016) Development of chromosome segment substitution lines harboring Oryza nivara genomic segments in Koshihikari and evaluation of yield-related traits. Breed. Sci., 66, 845-850.
https://www.jstage.jst.go.jp/article/jsbbs/66/5/66_16131/_html/ - #Bessho-Uehara, K., #Wang, D. R., Furuta, T., Minami, A., Nagai, K., Gamuyao, R., Asano, K., Angeles-Shim, R. B., Shimizu, Y., Ayano, M., Komeda, N., Doi, K., Miura, K., Toda, Y., Kinoshita, T., Okuda, S., Higashiyama, T., Nomoto, M., Tada, Y., Shinohara, H., Matsubayashi, Y., Greenberg, A., Wu, J., Yasui, H., Yoshimura, A., *Mori, H., *McCouch, S. R., and *Ashikari, M. (2016) Loss of function at RAE2, a previously unidentified EPFL, is required for awnlessness in cultivated Asian rice, Proc. Natl. Acad. Sci. U.S.A., 113, 8969-8974.
https://www.pnas.org/content/113/32/8969 - Toda, Y., Wang, Y., Takahashi, A., Kawai, Y., Tada, Y., Yamaji, N., Ma, J. F., Ashikari, M., and *Kinoshita, T. (2016) Oryza sativa H+-ATPase (OSA) is involved in the regulation of dumbbell-shaped guard cells of rice. Plant Cell Physiol., 57, 1220-1230.
http://pcp.oxfordjournals.org/content/57/6/1220
Buzas Group
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-2017-
- Review papers
- *Buzas, D. M. (2017) Capturing environmental plant memory in DNA, with a little help from chromatin. Plant Cell Physiol., 58, 1302-1312.
https://academic.oup.com/pcp/article-lookup/doi/10.1093/pcp/pcx092
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-2016-
- Original papers
- *Buzas, D. M. (2016) Emerging links between iron-sulfur clusters and 5-methylcytosine base excision repair in plants. Genes Genet. Syst., 91, 51-62.
https://www.jstage.jst.go.jp/article/ggs/91/2/91_16-00015/_article - Nishio, H., *Buzas D. M., Nagano, A. J., Suzuki, Y., Sugano, S., Ito, M., Morinaga, S., and *Kudoh, H. (2016) From the laboratory to the field: assaying histone methylation at FLOWERING LOCUS C in naturally growing Arabidopsis halleri. Genes Genet. Syst., 91, 15-26.
https://www.jstage.jst.go.jp/article/ggs/91/1/91_15-00071/_article
Fujii group
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-2016-
- Original papers
- #Yasuda, S., #Wada, Y., #Kakizaki, T., Tarutani, Y., Miura-Uno, E., Murase, K., Fujii, S., Hioki, T., Shimoda, T., Takada, Y., Shiba, H., Takasaki-Yasuda, T., Suzuki, G., *Watanabe, M., and *Takayama, S. (2016) A complex dominance hierarchy is controlled by polymorphism of small RNAs and their targets. Nature Plants, 3, 16206.
https://www.nature.com/articles/nplants2016206 - Kubo, K., Tsukahara, M., Fujii, S., Murase, K., Wada, Y., Entani, T., Iwano, M., and *Takayama, S. (2016) Cullin1-P is an essential component of non-self recognition system in self-incompatibility in Petunia. Plant Cell Physiol., 57, 2403-2416.
http://pcp.oxfordjournals.org/content/early/2016/08/26/pcp.pcw152.long - *Fujii, S., Suzuki, T., Giegé, P., Higashiyama, T., Koizuka, N., and Shikanai, T. (2016) The Restorer-of-fertility-like 2 pentatricopeptide repeat protein and RNase P are required for the processing of mitochondrial orf291 RNA in Arabidopsis. Plant J., 86, 504-513.
https://onlinelibrary.wiley.com/doi/full/10.1111/tpj.13185 - Review papers
- Fujii, S., Kubo, K., and *Takayama, S. (2016) Non-self- and self-recognition models in plant self-incompatibility. Nature Plants, 2, 16130.
http://www.nature.com/articles/nplants2016130
Kawasaki group
-
-2017-
- Original papers
- Yamaguchi, K., Mezaki, H., Fujiwara, M., Hara, Y., and *Kawasaki, T. Arabidopsis ubiquitin ligase PUB12 interacts with and negatively regulates Chitin Elicitor Receptor Kinase 1 (CERK1). PLOS ONE, 12, e0188886 (12 pages).
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0188886 - #Yamada, K., #Yamaguchi, K., Yoshimura, S., Terauchi, A., and Kawasaki, T. (2017) Conservation of chitin-induced MAPK signaling pathways in rice and Arabidopsis. Plant Cell Physiol., 58, 993-1002.
https://academic.oup.com/pcp/article/58/6/993/3078596 - Review papers
- *Kawasaki, T., Yamada, K., Yoshimura, S., and Yamaguchi, K. (2017) Chitin receptor-mediated activation of MAP kinases and ROS production in rice and Arabidopsis. Plant Signal. Behav., 12, e1361076 (5 pages).
http://www.tandfonline.com/doi/full/10.1080/15592324.2017.1361076
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-2016-
- Original papers
- #Yamada, K., #Yamaguchi, K., Shirakawa, T., Nakagami, H., Mine, A., Ishikawa, K., Fujiwara, M., Narusaka, M., Narusaka, Y., Ichimura, K., Kobayashi, Y., Matsui, H., Nomura, Y., Nomoto, M., Tada, Y., Fukao, Y., Fukamizo, T., Tsuda, K., Shirasu, K., Shibuya, N., and *Kawasaki, T. (2016) The Arabidopsis CERK1-associated kinase PBL27 connects chitin perception to MAPK activation. EMBO J., 35, 2468-2483.
http://emboj.embopress.org/content/35/22/2468
Kiba group
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-2017-
- Original papers
- Pudasaini, A., Shim, J. S., Song, Y. H., Shi, H., Kiba, T., Somers, D. E., Imaizumi, T., and *Zoltowski, B. D. (2017) Kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis. eLIFE, 6, e21646 (27 pages).
https://elifesciences.org/articles/21646 - Osugi, O., Kojima, M., Takebayashi, Y., Ueda, N., Kiba, T., and *Sakakibara, H. (2017) Systemic transport of trans-zeatin and its precursor have differing roles in Arabidopsis shoots. Nature Plants, 3 , 17112.
https://www.nature.com/articles/nplants2017112 - #Spallek, T., #Melnyk, C. W., Wakatake, T., Zhang, J., Sakamoto, Y., Kiba, T., Yoshida, S., Matsunaga, S., Sakakibara, H., and *Shirasu, K. (2017) Interspecies hormonal control of host root morphology by parasitic plants. Proc. Natl. Acad. Sci. U.S.A., 114, 5283-5288.
http://www.pnas.org/content/114/20/5283
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-2016-
- Original papers
- *Kiba, T. and Henriques, R. (2016) Assessing protein stability under different light and circadian conditions. Methods Mol. Biol., 398, 141-152.
https://link.springer.com/protocol/10.1007%2F978-1-4939-3356-3_13 - *Nakamichi, N., Takao, S., Kudo, T., Kiba, T., Wang, Y., Kinoshita, T., and Sakakibara, H. (2016) Improvement of Arabidopsis biomass and cold, drought, and salinity stress tolerance by modified circadian clock-associated PSEUDO-RESPONSE REGULATORs. Plant Cell Physiol., 57, 1085-1097.
http://pcp.oxfordjournals.org/content/57/5/1085 - Review papers
- *Kiba, T. and *Krapp, A. (2016) Plant nitrogen acquisition under low availability: regulation of uptake and root architecture. Plant Cell Physiol., 57, 707-714.
https://academic.oup.com/pcp/article/57/4/707/2461115
Kimura group
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-2017-
- Original papers
- Yoshiyama, K. O., Kaminoyama, K., Sakamoto, T., and *Kimura, S. (2017) Increased phosphorylation of Ser-Gln sites on SUPPRESSOR OF GAMMA RESPONSE1 strengthens the DNA damage response in Arabidopsis thaliana. Plant Cell, 29, 3255-3268.
http://www.plantcell.org/content/29/12/3255 - *Nakamasu, A., Suematsu, N. J., and Kimura, S. (2017) Asymmetries in leaf branch are associated with differential speeds along growth axes: A theoretical prediction. Dev. Dyn., 246, 981-991.
http://onlinelibrary.wiley.com/doi/10.1002/dvdy.24587/full - Kawakatsu, Y., Nakayama, H., Kaminoyama, K., Igarashi, K., Yasugi, M., Kudoh, H., Nagano, A. J., Yano, K., Kubo, N., and Kimura, S. (2017) A GLABRA1 ortholog on LG A9 controls trichome number in the Japanese leafy vegetables Mizuna and Mibuna (Brassica rapa L. subsp. nipposinica L. H. Bailey): evidence from QTL analysis. J. Plant Res., 130, 539-550.
https://link.springer.com/article/10.1007%2Fs10265-017-0917-5 - Review papers
- Nakayama, H., Sinha, N. R., and *Kimura, S. (2017) How do plants and phytohormones accomplish heterophylly, leaf phenotypic plasticity, in response to environmental cues. Front. Plant Sci., 8, 1717 (7 pages).
https://www.frontiersin.org/articles/10.3389/fpls.2017.01717/full
Matsushita group
-
-2017-
- Original papers
- #Ushijima, T., #Hanada, K., Gotoh, E., Yamori, W., Kodama, Y., Tanaka, H., Kusano, M., Fukushima, A., Tokizawa, M., Yamamoto, Y. Y., Tada, Y., Suzuki, Y., and *Matsushita, T. (2017) Light controls protein localization through phytochrome-mediated alternative promoter selection. Cell, 171, 1316-1325.
http://www.sciencedirect.com/science/article/pii/S0092867417312400
Miura group
-
-2017-
- Original papers
- #Shimatani, Z., #Kashojiya, S., #Takayama, M., Terada, R., Arazoe, T., Ishii, H., Teramura, H., Yamamoto, T., Komatsu, H., Miura, K., *Ezura, H., *Nishida, K., *Ariizumi, T., and Kondo, A. (2017) Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion. Nature Biotechnol., 35, 441-443.
https://www.nature.com/articles/nbt.3833
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-2016-
- Original papers
- Lin, X. L., Niu, D., Hu, Z. L., Kim, D. H., Jin, Y. H., Cai, B., Liu, P., Miura, K., Yun, D. J., Kim, W. Y., Lin, R., and *Jin, J. B. (2016) An Arabidopsis SUMO E3 ligase, SIZ1 negatively regulates photomorphogenesis by promoting COP1 activity. PLoS Genet. 12, e1006016 (21 pages).
http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006016 - *Kitajima, S., *Miura, K., Aoki, W., Yamato, K. T., Taira, T., Murakami, R., and Aburaya, S. (2016) Transcriptome and proteome analyses provide insight into laticifer's defense of Euphorbia tirucalli against pests. Plant Physiol. Biochem., 108, 434-446.
https://www.sciencedirect.com/science/article/pii/S0981942816303333
Nagano group
-
-2017-
- Original papers
- Iwayama, K., Aisaka, Y., Kutsuna, N., *Nagano, A. J. (2017) FIT: statistical modeling tool for transcriptome dynamics under fluctuating field conditions. Bioinformatics, 33, 1672-1680.
https://academic.oup.com/bioinformatics/article/33/11/1672/2964729 - Kawakatsu, Y., Nakayama, H., Kaminoyama, K., Igarashi, K., Yasugi, M., Kudoh, H., Nagano, A. J., Yano, K., Kubo, N., and Kimura, S. (2017) A GLABRA1 ortholog on LG A9 controls trichome number in the Japanese leafy vegetables Mizuna and Mibuna (Brassica rapa L. subsp. nipposinica L. H. Bailey): evidence from QTL analysis. J. Plant Res., 130, 539-550.
https://link.springer.com/article/10.1007%2Fs10265-017-0917-5
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-2016-
- Original papers
- Nishio, H., *Buzas D. M., Nagano, A. J., Suzuki, Y., Sugano, S., Ito, M., Morinaga, S., and *Kudoh, H. (2016) From the laboratory to the field: assaying histone methylation at FLOWERING LOCUS C in naturally growing Arabidopsis halleri. Genes Genet. Syst., 91, 15-26.
https://www.jstage.jst.go.jp/article/ggs/91/1/91_15-00071/_article - #*Hoshino, A., #Jayakumar, V., Nitasaka, E., Toyoda, A., Noguchi, H., Itoh, T., Shin-I, T., Minakuchi, Y., Koda, Y., Nagano, A. J., Yasugi, M., Honjo, M. N., Kudoh, H., Seki, M., Kamiya, A., Shiraki, T., Carninci, P., Asamizu, E., Nishide, H., Tanaka, S., Park, K. I., Morita, Y., Yokoyama, K., Uchiyama, I., Tanaka, Y., Tabata, S., Shinozaki, K., Hayashizaki, Y., Kohara, Y., Suzuki, Y., Sugano, S., Fujiyama, A., Iida, S., and *Sakakibara, Y. (2016) Genome sequence and analysis of the Japanese morning glory Ipomoea nil. Nature Commun., 7, 13295. (10 pages).
http://www.nature.com/articles/ncomms13295
Notaguchi group
-
-2017-
- Original papers
- *Kasahara, R. D., Notaguchi, M., and Honma, Y. (2017) Discovery of pollen tube-dependent ovule enlargement morphology phenomenon, a new step in plant reproduction. Commun. Integr. Biol., 10, e1338989 (4 pages).
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5595410/ - Review papers
- Tsutsui, H. and *Notaguchi, M. (2017) The use of grafting to study systemic signaling in plants. Plant Cell Physiol., 58, 1291-1301.
https://doi.org/10.1093/pcp/pcx098 - *Notaguchi, M. (2017) Systemic RNA in plants. BSJ-Review, 8, 121-129.
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-2016-
- Original papers
- #*Kasahara, R. D., #Notaguchi, M., Nagahara, S., Suzuki, T., Susaki, D., Honma, Y., Maruyama, D., and Higashiyama, T. (2016) Pollen tube contents initiate ovule enlargement and enhance seed coat development without fertilization. Sci. Adv., 2, e1600554 (7 pages).
http://advances.sciencemag.org/content/2/10/e1600554.full
Saijo group
-
-2017-
- Original papers
- Ariga, H., #Katori, T., #Tsuchimatsu, T., Hirase, T., Tajima, Y., Parker, J. E., Alcázar, R., Koornneef, M., Hoekenga, O., Lipka, A. E., Gore, M. A., Sakakibara, H., Kojima, M., Kobayashi, Y., Iuchi, S., Kobayashi, M., Shinozaki, K., Sakata, Y., Hayashi, T., Saijo, Y., and *Taji, T. (2017) NLR locus-mediated trade-off between abiotic and biotic stress adaptation in Arabidopsis. Nature Plants, 3, 17072 (8 pages).
https://www.nature.com/articles/nplants201772 - Review papers
- #Yasuda, S., #Okada, K., and *Saijo, Y. (2017) A look at plant immunity through the window of the multitasking coreceptor BAK1. Curr. Opin. Plant Biol., 38, 10-18.
http://www.sciencedirect.com/science/article/pii/S1369526617300110
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-2016-
- Review papers
- *Espinas, N. A., Saze, H. and *Saijo, Y. (2016) Epigenetic control of defense signaling and priming in plants. Front. Plant Sci., 7, 1201.
http://journal.frontiersin.org/article/10.3389/fpls.2016.01201/full
Seki group
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-2017-
- Original papers
- Ueda, M., Matsui, A., Tanaka, M., Nakamura, T., Abe, T., Sako, K., Sasaki, T., Kim, J. M., Ito, A., Nishino, N., Shimada, H., Yoshida, M., and *Seki, M. (2017) The distinct roles of class I and II RPD3-like histone deacetylases in salinity stress response. Plant Physiol., 175, 1760-1773.
http://www.plantphysiol.org/content/175/4/1760 - Li, W., Nguyen, K. H., Chu, H. D., Ha, C. V., Watanabe, Y., Osakabe, Y., Leyva-González, M., Sato, M., Toyooka, K., Voges, L., Tanaka, M., Mostofa, M. G., Seki, M., Seo, M., Yamaguchi, S., Nelson, D. C., Tian, C., Herrera-Estrella, L., and *Tran, L. P. (2017) The karrikin receptor KAI2 promotes drought resistance in Arabidopsis thaliana. PLoS Genet., 13, e1007076 (23 pages).
http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1007076 - Shirai, K., Matsuda, F., Nakabayashi, R., Okamoto, M., Tanaka, M., Fujimoto, A., Shimizu, M., Shinozaki, K., Seki, M., Saito, K., and *Hanada, K. (2017) A highly specific genome-wide association study integrated with transcriptome data reveals the contribution of copy number variations to specialized metabolites in Arabidopsis thaliana accessions. Mol. Biol. Evol., 34, 3111-3122.
https://academic.oup.com/mbe/article-abstract/34/12/3111/4110007?redirectedFrom=fulltext - Matsui, A., Iida, K., Tanaka, M., Yamaguchi, K., Mizunashi, K., Kim, J. M., Takahashi, S., Kobayashi, N., Shigenobu, S., Shinozaki, K., and *Seki, M. (2017) Novel stress-inducible antisense RNAs of protein-coding loci are synthesized by RNA-dependent RNA polymerase. Plant Physiol., 175, 457-472.
http://www.plantphysiol.org/content/175/1/457.long - Nguyen, H. M., Sako, K., Matsui, A., Suzuki, Y., Mostofa, M. G., Ha, C. V., Tanaka, M., Tran, L. P., Habu, Y., and *Seki, M. (2017) Ethanol enhances high-salinity stress tolerance by detoxifying reactive oxygen species in Arabidopsis thaliana and rice. Front. Plant Sci., 8, 1001 (10 pages).
http://journal.frontiersin.org/article/10.3389/fpls.2017.01001/full - #*Kim, J. M., #To, T. K., Matsui, A., Tanoi, K., Kobayashi, N. I., Matsuda, F., Habu, Y., Ogawa, D., Sakamoto, T., Matsunaga, S., Bashir, K., Rasheed, S., Ando, M., Takeda, H., Kawaura, K., Kusano, M., Fukushima, A., Takaho, A. E., Kuromori, T., Ishida, J., Morosawa, T., Tanaka, M., Torii, C., Takebayashi, Y., Sakakibara, H., Ogihara, Y., Saito, K., Shinozaki, K., Devoto, A., and *Seki, M. (2017) Acetate-mediated novel survival strategy against drought in plants. Nature Plants, 3, 17097 (7 pages).
https://www.nature.com/articles/nplants201797 - Nguyen, C. C., Nakaminami, K., Matsui, A., Watanabe, S., Kanno, Y., Seo, M., and *Seki, M. (2017) Overexpression of oligouridylate binding protein 1b results in ABA hypersensitivity. Plant Signal. Behav., 12, e1282591 (10 pages).
https://www.tandfonline.com/doi/full/10.1080/15592324.2017.1282591 - Patanun, O., Ueda, M., Itouga, M., Kato, Y., Utsumi, Y., Matsui, A., Tanaka, M., Utsumi, C., Sakakibara, H., Yoshida, M., Narangajavana, J., and *Seki, M. (2017) The histone deacetylase inhibitor suberoylanilide hydroxamic acid alleviates salinity stress in cassava. Front. Plant Sci, 7, 2039 (16 pages).
https://www.frontiersin.org/articles/10.3389/fpls.2016.02039/full - #Kurita, K., #Sakamoto, T., Yagi, N., Sakamoto, Y., Ito, A., Nishino, N., Sako, K., Yoshida, M., Kimura, H., Seki, M., and *Matsunaga, S. (2017) Live imaging of H3K9 acetylation in plant cells. Sci. Rep., 7, 45894 (9 pages).
https://www.nature.com/articles/srep45894
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-2016-
- Original papers
- Okamoto, M., Matsui, A., Tanaka, M., Morosawa, T., Ishida, J., Iida, K., Mochizuki, Y., Toyoda, T., and *Seki, M. (2016) Sm-like protein-mediated RNA metabolism is required for heat stress tolerance in Arabidopsis. Front. Plant Sci., 7, 1079 (11 pages).
http://journal.frontiersin.org/article/10.3389/fpls.2016.01079/full - Nguyen, C. C., Nakaminami, K., Matsui, A., Kobayashi, S., Kurihara, Y., Toyooka, K., Tanaka, M., and *Seki, M. (2016) Oligouridylate binding protein 1b plays an integral role in plant heat stress tolerance. Front. Plant Sci., 7, 853 (9 pages).
http://journal.frontiersin.org/article/10.3389/fpls.2016.00853/full
Suzaki group
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-2017-
- *Ohtsu, M., Kurihara, D., Sato, Y., Suzaki, T., Kawaguchi, M., Maruyama, D., and Higashiyama, T. (2017) Fluorescent labeling of the cyst nematode Heterodera glycines in deep-tissue live imaging. Cytologia, 82, 251-259.
https://www.jstage.jst.go.jp/article/cytologia/82/3/82_MS1940/_article - *Ohtsu, M., Sato, Y., Kurihara, D., Suzaki, T., Kawaguchi, M., Maruyama, D., and Higashiyama, T. (2017) Spatiotemporal deep imaging of syncytium induced by the soybean cyst nematode Heterodera glycines. Protoplasma, 254, 2107-2115.
https://link.springer.com/article/10.1007%2Fs00709-017-1105-0 - Review papers
- Cui, S., Suzaki, T., Tominaga-Wada, R., and *Yoshida, S. (2017) Regulation and functional diversification of root hairs. Semin. Cell Dev. Biol., 83, 115-122.
http://www.sciencedirect.com/science/article/pii/S1084952116304323
- *Ohtsu, M., Kurihara, D., Sato, Y., Suzaki, T., Kawaguchi, M., Maruyama, D., and Higashiyama, T. (2017) Fluorescent labeling of the cyst nematode Heterodera glycines in deep-tissue live imaging. Cytologia, 82, 251-259.
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-2016-
- Original papers
- Nishida, H., Handa, Y., Tanaka, S., *Suzaki, T., and *Kawaguchi, M. (2016) Expression of the CLE-RS3 gene suppresses root nodulation in Lotus japonicus. J. Plant Res., 129, 909-919.
http://link.springer.com/article/10.1007%2Fs10265-016-0842-z - Pfeiffer, A., Janocha, D., Dong, Y., Medzihradszky, A., Schöne, S., Daum, G., Suzaki, T., Forner, J., Langenecker, T., Rempel, E., Schmid, M., Wirtz, M., Hell, R., and *Lohmann, J. U. (2016) Integration of light and metabolic signals for stem cell activation at the shoot apical meristem. eLife, 5, e17023 (21 pages).
https://elifesciences.org/content/5/e17023
Takahashi group
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-2017-
- Original papers
- #Morimoto, K., #Ohama. N., Kidokoro, S., Mizoi, J., Takahashi, F., Todaka, D., Mogami, J., Sato, H., Qin, F., Kim, J. S., Fukao, Y., Fujiwara, M., Shinozaki, K., and *Yamaguchi-Shinozaki, K. (2017) BPM-CUL3 E3 ligase modulates thermotolerance by facilitating negative regulatory domain-mediated degradation of DREB2A in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A., 114, E8528-E8536.
http://www.pnas.org/content/114/40/E8528.full - Kidokoro, S., Yoneda, K., Takasaki, H., Takahashi, F., Shinozaki, K., and *Yamaguchi-Shinozaki, K. (2017) Different cold-signaling pathways function in the responses to rapid and gradual decreases in temperature. Plant Cell, 29, 760-774.
http://www.plantcell.org/content/29/4/760 - #Soma, F., #Mogami, J., Yoshida, T., Abekura, M., Takahashi, F., Kidokoro, S., Mizoi, J., Shinozaki, K., and *Yamaguchi-Shinozaki, K. (2017) ABA-unresponsive SnRK2 protein kinases regulate mRNA decay under osmotic stress in plants. Nature Plants, 3, 16204.
https://www.nature.com/articles/nplants2016204
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-2016-
- Original papers
- Ohama, N., Kusakabe, K., Mizoi, J., Zhao, H., Kidokoro, S., Koizumi, S., Takahashi, F., Ishida, T., Yanagisawa, S., Shinozaki, K., and *Yamaguchi-Shinozaki, K. (2016) The transcriptional cascade in the heat stress response of Arabidopsis is strictly regulated at the level of transcription factor expression. Plant Cell, 28, 181-201.
http://www.plantcell.org/content/28/1/181
Takezawa group
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-2017-
- Original papers
- *Bowman, J. L., *Kohchi, T., *Yamato, K. T., Jenkins, J., Shu, S., Ishizaki, K., Yamaoka, S., Nishihama, R., Nakamura, Y., Berger, F., Adam, C, Aki, S. S., Althoff, F., Araki, T., Arteaga-Vazquez, M. A., Balasubrmanian, S., Barry, K., Bauer, D., Boehm, C. R., Briginshaw, L., Caballero-Perez, J., Catarino, B., Chen, F., Chiyoda, S., Chovatia, M., Davies, K. M., Delmans, M., Demura, T., Dierschke, T., Dolan, L., Dorantes-Acosta, A. E., Eklund, D. M., Florent, S. N., Flores-Sandoval, E., Fujiyama, A, Fukuzawa, H., Galik, B., Grimanelli, D., Grimwood, J., Grossniklaus, U., Hamada, T., Haseloff, J., Hetherington, A. J., Higo, A., Hirakawa, Y., Hundley, H. N, Ikeda, Y., Inoue, K., Inoue, S., Ishida, S., Jia, O., Kakita, M., Kanazawa, T., Kawai, Y., Kawashima, T., Kennedy, M., Kinose, K., Kinoshita, T., Kohara, Y., Koide, E., Komatsu, K., Kopischke, S., Kubo, M., Kyozuka, J., Lagercrantz, U., Lin, S. S., Lindquist, E., Lipzen, A. M., Lu, C. W., De Luna, E., Martienssen, R. A., Minamino, N., Mizutani, M., Mizutani, M., Mochizuki, N., Monte, I., Mosher, R., Nagasaki, H., Nakagami, H., Naramoto, S., Nishitani, K., Ohtani, M., Okamoto, T., Okumura, M., Phillips, J., Pollak, B., Reinders, A., Rövekamp, M., Sano, R., Sawa, S., Schmid, M. W., Shirakawa, M., Solano, R., Spunde, A., Suetsugu, N., Sugano, S., Sugiyama, A., Sun, R., Suzuki, Y., Takenaka, M., Takezawa, D., Tomogane, H., Tsuzuki, M., Ueda, T., Umeda, M., Ward, J. M., Watanabe, Y., Yazaki, K., Yokoyama, R., Yoshitake, Y., Yotsui, I., Zachgo, S., and Schmutz, J. (2017) Insights into land plant evolution garnered from the Marchantia polymorpha genome. Cell,, 171, 287-304.
http://www.sciencedirect.com/science/article/pii/S0092867417311248 - Hagiwara, K., Saruhashi, M., Ishizaki, Y., Sakata, Y., and *Takezawa, D. (2017) Isolation of abscisic acid-insensitive mutant lines of Physcomitrella patens by ultraviolet irradiation mutagenesis. Cryobiol. Cryotechnol., 63, 53-56.
https://www.jstage.jst.go.jp/article/cryobolcryotechnol/63/1/63_53/_article
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-2016-
- Original papers
- Ghosh, T. K., Kaneko, M., Akter, K., Murai, S., Komatsu, K., Ishizaki, K., Yamato, K. T., Kohchi, T., and *Takezawa, D. (2016) Abscisic acid-induced gene expression in the liverwort Marchantia polymorpha is mediated by evolutionarily conserved promoter elements. Physiol. Plant., 156, 407-420.
https://onlinelibrary.wiley.com/doi/10.1111/ppl.12385
Uchida group
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-2017-
- Original papers
- Ziadi, A., Uchida, N., Kato, H., Hisamatsu, R., Sato, A., Hagihara, S., *Itami, K., and *Torii, K. U. (2017) Discovery of synthetic small molecules that enhance the number of stomata: C-H functionalization chemistry for plant biology. Chem. Commun., 53, 9632-9635.
http://pubs.rsc.org/en/Content/ArticleLanding/2017/CC/C7CC04526C#!divAbstract - Hirakawa, Y., Shinohara, H., Welke, K., Irle, S., Matsubayashi, Y., *Torii, K. U., and *Uchida, N. (2017) Cryptic bioactivity capacitated by synthetic hybrid plant peptides. Nature Commun., 8, 14318 (7 pages).
http://www.nature.com/articles/ncomms14318 - Ikematsu, S., Tasaka, M., *Torii, K. U., and *Uchida, N. (2017) ERECTA-family receptor kinase genes redundantly prevent premature progression of secondary growth in the Arabidopsis hypocotyl. New Phytol., 213, 1697-1709.
https://doi.org/10.1111/nph.14335 - Review papers
- *Hirakawa, Y., *Torii, K. U., and *Uchida, N. (2017) Mechanisms and strategies shaping plant peptide hormones. Plant Cell Physiol., 58, 1313-1318.
https://academic.oup.com/pcp/article-lookup/doi/10.1093/pcp/pcx069 - Tameshige, T., Ikematsu, S., *Torii, K. U., and *Uchida, N. (2017) Stem development through vascular tissues: EPFL-ERECTA family signaling that bounces in and out of phloem. J. Exp. Bot., 68, 45-53.
https://academic.oup.com/jxb/article/68/1/45/2670566
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-2016-
- Original papers
- Tameshige, T., Okamoto, S., Tasaka, M., *Torii, K. U., and *Uchida, N. (2016) Impact of erecta mutation on leaf serration differs between Arabidopsis accessions. Plant Signal. Behav., 12, e1261231 (3 pages).
https://www.tandfonline.com/doi/full/10.1080/15592324.2016.1261231 - Tameshige, T., Okamoto, S., Lee, J. S., Aida, M., Tasaka, M., *Torii, K. U., and *Uchida, N. (2016) A secreted peptide and its receptors shape the auxin response pattern and leaf margin morphogenesis. Curr. Biol., 26, 2478-2485.
https://www.cell.com/current-biology/fulltext/S0960-9822(16)30765-5 - #Ogawa, T., #Mori, A., Igari, K., Morita, M. T., *Tasaka, M., and *Uchida, N. (2016) Efficient in planta detection and dissection of de novo mutation events in the Arabidopsis thaliana disease resistance gene UNI. Plant Cell Physiol., 57, 1123-1132.
https://academic.oup.com/pcp/article/57/6/1123/2461008
Yamaguchi group
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-2017-
- Original papers
- #Yamaguchi, N., #Huang, J., Xu, Y., Tanoi, K., and *Ito, T. (2017) Fine-tuning of auxin homeostasis governs the transition from floral stem cell maintenance to gynoecium formation. Nature Commun., 8, 1125 (15 pages).
https://www.nature.com/articles/s41467-017-01252-6