研究成果 計画研究班・研究成果

*Corresponding author, #These authors contributed equally to this work.
実線下線は研究代表者、点線下線は研究分担者

計画研究班

木下班

  • -2019年-
    原著論文
    #Uehara, T. N., #Mizutani, Y., Kuwata, K., Hirota, T., Sato, A., Mizoi, J., Takao, S., Matsuo, H., Suzuki, T., Ito, S., Saito, A. N., Nishiwaki-Ohkawa, T., Yamaguchi-Shinozaki, K., Yoshimura, T,. Kay, S. A., Itami, K., Kinoshita, T., *Yamaguchi, J., and *Nakamichi, N. (2019) Casein kinase 1 family regulates PRR5 and TOC1 in the Arabidopsis circadian clock. Proc. Natl. Acad. Sci. U.S.A., 116, 11528-11536. [プレスリリース][新聞ネット記事]
    https://doi.org/10.1073/pnas.1903357116
    *#Minami, A., #Takahashi, K., Inoue, S., Tada, Y., and Kinoshita, T. (2019) Brassinosteroid induces phosphorylation of the plasma membrane H+-ATPase during hypocotyl elongation in Arabidopsis thaliana. Plant Cell Physiol., 60, 935-944. [ハイライト]
    https://academic.oup.com/pcp/article/60/5/935/5289540
    Toda, Y., Kudo, T., Kinoshita, T., and *Nakamichi, N. (2019) Evolutionary insight into the clock-associated PRR5 transcriptional network of flowering plants. Sci. Rep., 9, 2983 (14 pages).
    https://www.nature.com/articles/s41598-019-39720-2
    Oochi, A., Hajny, J., Fukui, K., Nakao, Y., Gallei, M., Quareshy, M., Takahashi, K., Kinoshita, T., Harborough, S. R., Kepinski, S., Kasahara, H., Napier, R., Friml, J., and *Hayashi, K. (2019) Pinstatic acid promotes auxin transport by inhibiting PIN internalization. Plant Physiol., 180, 1152-1165.
    http://www.plantphysiol.org/content/180/2/1152
    Tanaka-Takada, N., Kobayashi, A., Takahashi, H., Kamiya, T., Kinoshita, T., and *Maeshima, M. (2019) Plasma membrane-associated Ca2+-binding protein PCaP1 is involved in root hydrotropism of Arabidopsis thaliana. Plant Cell Physiol., 60, 1331–1341.
    https://academic.oup.com/pcp/article-abstract/60/6/1331/5369098
    Asaoka, M., Inoue, S., Gunji, S., Kinoshita, T., Maeshima, M., Tsukaya, H., and *Ferjani, A. (2019) Excess pyrophosphate within guard cells delays stomatal closure. Plant Cell Physiol., 60, 875–887.
    https://academic.oup.com/pcp/article-abstract/60/4/875/5289541
    Ando, E. and *Kinoshita, T. (2019) Fluence rate dependence of red light-induced phosphorylation of plasma membrane H+-ATPase in stomatal guard cells. Plant Signal. Behav., 14, 1561107.
    https://doi.org/10.1080/15592324.2018.1561107
    プレスリリース
    低分子化合物で植物時計の仕組みを発見!(2019年5月17日)
    http://www.nagoya-u.ac.jp/about-nu/public-relations/researchinfo/upload_images/20190517_itbm001.pdf
    新聞ネット記事・テレビ報道
    中日新聞(2019年5月14日)植物の生物時計を変化させる化合物 名大などグループ発見
  • -2018年-
    原著論文
    Ando, E. and *Kinoshita, T. (2018) Red light-induced phosphorylation of plasma membrane H+-ATPase in stomatal guard cells. Plant Physiol., 178, 838-849.
    http://www.plantphysiol.org/content/178/2/838
    *Kinoshita, T., *McCourt, P., Asami, T., and *Torii, K. U. (2018) Plant chemical biology. Plant Cell Physiol., 59, 1483-1486.
    https://academic.oup.com/pcp/article/59/8/1483/5056048
    Yamada, R., Murai, K., Uchida, N., Takahashi, K., Iwasaki, R., Tada, Y., Kinoshita, T., Itami, K., *Torii, K. U., and *Hagihara, S. (2018) A super strong engineered auxin-TIR1 pair. Plant Cell Physiol., 59, 1538-1544.
    https://academic.oup.com/pcp/article-abstract/59/8/1538/5050406
    *#Nishimura, N., #Tsuchiya, W., Moresco, J. J., Hayashi, Y., Satoh, K., Kaiwa, N., Irisa, T., Kinoshita, T., Schroeder, J. I., Yates, III J. R., Hirayama, T., and Yamazaki, T. (2018) Control of seed dormancy and germination by DOG1-AHG1 PP2C phosphatase complex via binding to heme. Nature Commun., 9, 2132 (14 pages).
    https://www.nature.com/articles/s41467-018-04437-9
    Yoshimura, M., Sato, A., Kuwata, K., Inukai, Y., Kinoshita, T., Itami, K., *Tsuchiya, Y., and *Hagihara, S. (2018) Discovery of shoot branching regulator targeting strigolactone receptor DWARF14. ACS Cent. Sci., 4, 230-234.
    https://pubs.acs.org/doi/full/10.1021/acscentsci.7b00554
    *Uraguchi, D., Kuwata, K., Hijikata, Y., Yamaguchi, R., Imaizumi, H., Am, S., Rakers, C., Mori, N., Akiyama, K., Irle, S., McCourt, P., Kinoshita, T., *Ooi, T., and *Tsuchiya, Y. (2018) A femtomolar-range suicide germination stimulant for the parasitic plant Striga hermonthica. Science, 362, 1301-1305. [プレスリリース] [新聞ネット記事]
    http://science.sciencemag.org/content/362/6420/1301
    Toh, S., Inoue, S., Toda, Y., Yuki, T., Suzuki, K., Hamamoto, S., Fukatsu, K., Aoki, S., Uchida, M., Asai, E., Uozumi, N., Sato, A., and *Kinoshita, T. (2018) Identification and characterization of compounds that affect stomatal movements. Plant Cell Physiol., 59, 1568-1580. [プレスリリース] [新聞ネット記事]
    https://academic.oup.com/pcp/article/59/8/1568/4950858
    #Uchida, N., #Takahashi, K., Iwasaki, R., Yamada, R., Yoshimura, M., Endo, T. A., Kimura, S., Zhang, H., Nomoto, M., Tada, Y., Kinoshita, T., Itami, K., *Hagihara, S., and *Torii, K. U. (2018) Chemical hijacking of auxin signaling with an engineered auxin-TIR1 pair. Nature Chem. Biol., 14, 299-305.
    https://www.nature.com/articles/nchembio.2555
    プレスリリース
    アフリカで猛威を振るう寄生植物ストライガの撲滅に向けて ~スフィンクスの名をもつ発芽刺激分子で穀物被害の軽減へ~ (2018年12月17日)
    http://www.itbm.nagoya-u.ac.jp/ja/research/2018/12/Striga-SPL7.php
    気孔開口を抑制する新しい化合物を発見 ~植物のしおれを抑える新たな技術開発に期待~ (2018年4月9日)
    http://www.itbm.nagoya-u.ac.jp/ja/research/2018/04/SCL-Kinoshita.php
    新聞ネット記事・テレビ報道
    日経産業新聞 (2018年12月18日) 朝刊6面 寄生植物被害 撲滅へ アフリカで名大、新薬剤を開発
    毎日新聞 (2018年12月16日) 朝刊27面 「魔女の雑草」駆除に光 アフリカで年間1兆円被害
    毎日新聞web (2018年12月16日) 発芽誘発分子 名大研究グループが発見 「魔女の雑草」駆除に光 アフリカで年間1兆円被害
    https://mainichi.jp/articles/20181216/ddq/041/040/013000c
    中日新聞web (2018年12月16日) 中日春秋
    http://www.chunichi.co.jp/article/column/syunju/CK2018121602000109.html
    朝日新聞web (2018年12月14日)  「魔女の雑草」撲滅に期待 琵琶湖に小さじ1杯で...
    https://www.asahi.com/articles/ASLDC5777LDCULBJ00N.html
    時事ドットコムニュース (2018年12月14日) 「魔女の雑草」駆除に道=アフリカで猛威の寄生植物-名大など
    https://www.jiji.com/jc/article?k=2018121400063&g=soc
    毎日新聞web (2018年12月14日)  "魔女の雑草" 駆除に有効な分子を名大Gが発見 食糧問題解決に道
    https://mainichi.jp/articles/20181213/k00/00m/040/230000c
    読売新聞web (2018年12月14日)  穀物枯らす「魔女の雑草」、駆除薬剤を開発
    https://www.yomiuri.co.jp/science/20181214-OYT1T50013.html
    日本経済新聞web (2018年12月14日) アフリカの寄生植物を効率駆除 名大が化合物を開発
    https://www.nikkei.com/article/DGXMZO38895670T11C18A2TJM000/
    産経ニュース (2018年12月14日) 「魔女の雑草」退治へ アフリカ食糧問題解決に新手法
    https://www.sankei.com/life/news/181214/lif1812140021-n1.html
    日本の研究.com (2018年12月14日) アフリカで猛威を振るう寄生植物ストライガの撲滅に向けて ~スフィンクスの名をもつ発芽刺激分子で穀物被害の軽減へ~
    https://research-er.jp/articles/view/76049
    中日新聞 (2018年12月14日) 朝刊30面 「魔女の雑草」解く新薬 名大グループ安価で製造 アフリカ食糧問題に光
    朝日新聞 (2018年12月14日) 朝刊6面 「魔女の雑草」退治 分子を開発 名大チーム
    ニュースイッチ (2018年4月30日) 植物のしおれを防止する化合物 名古屋大学が発見
    https://newswitch.jp/p/12780
    日刊工業新聞 (2018年4月27日) 植物、しおれ抑制して長持ち 名大が耐乾燥性化合物を発見
    https://www.nikkan.co.jp/articles/view/00471423
    日経産業新聞 (2018年4月12日) 5面「気孔」開口を制御 植物の耐乾防ぐ 名古屋大が化合物特定
    中日新聞(2018年4月10日)朝刊3面 生花の葉にシュッ みずみずしさ維持 名大チーム 気孔の開き 抑える物質発見
    朝日新聞デジタル(2018年4月10日)葉の乾燥抑える化合物発見 生け花の鮮度保つ効果期待
    https://www.asahi.com/articles/ASL465HCJL46OIPE01R.html
    朝日新聞(2018年4月9日)夕刊8面 葉っぱにシュッ しおれ抑える 名大チーム、新たな化合物発見
    EurekAlert! JP(2018年4月9日)気孔開口を抑制する新しい化合物を発見
    https://www.eurekalert.org/pub_releases_ml/2018-04/iotb-i040818.php
    日本の研究.com(2018年4月9日)気孔開口を抑制する新しい化合物を発見 ~植物のしおれを抑える新たな技術開発に期待~
    https://research-er.jp/articles/view/69620
    AlphaGalileo JP(2018年4月9日)気孔開口を抑制する新しい化合物を発見 ~植物のしおれを抑える新たな技術開発に期待~
    https://www.alphagalileo.org/en-gb/Item-Display/ItemId/161937
  • -2017年-
    原著論文
    *Bowman, J. L., *Kohchi, T., *Yamato, K. T., Jenkins, J., Shu, S., Ishizaki, K., Yamaoka, S., Nishihama, R., Nakamura, Y., Berger, F., Adam, C, Aki, S. S., Althoff, F., Araki, T., Arteaga-Vazquez, M. A., Balasubrmanian, S., Barry, K., Bauer, D., Boehm, C. R., Briginshaw, L., Caballero-Perez, J., Catarino, B., Chen, F., Chiyoda, S., Chovatia, M., Davies, K. M., Delmans, M., Demura, T., Dierschke, T., Dolan, L., Dorantes-Acosta, A. E., Eklund, D. M., Florent, S. N., Flores-Sandoval, E., Fujiyama, A, Fukuzawa, H., Galik, B., Grimanelli, D., Grimwood, J., Grossniklaus, U., Hamada, T., Haseloff, J., Hetherington, A. J., Higo, A., Hirakawa, Y., Hundley, H. N, Ikeda, Y., Inoue, K., Inoue, S., Ishida, S., Jia, O., Kakita, M., Kanazawa, T., Kawai, Y., Kawashima, T., Kennedy, M., Kinose, K., Kinoshita, T., Kohara, Y., Koide, E., Komatsu, K., Kopischke, S., Kubo, M., Kyozuka, J., Lagercrantz, U., Lin, S. S., Lindquist, E., Lipzen, A. M., Lu, C. W., De Luna, E., Martienssen, R. A., Minamino, N., Mizutani, M., Mizutani, M., Mochizuki, N., Monte, I., Mosher, R., Nagasaki, H., Nakagami, H., Naramoto, S., Nishitani, K., Ohtani, M., Okamoto, T., Okumura, M., Phillips, J., Pollak, B., Reinders, A., Rövekamp, M., Sano, R., Sawa, S., Schmid, M. W., Shirakawa, M., Solano, R., Spunde, A., Suetsugu, N., Sugano, S., Sugiyama, A., Sun, R., Suzuki, Y., Takenaka, M., Takezawa, D., Tomogane, H., Tsuzuki, M., Ueda, T., Umeda, M., Ward, J. M., Watanabe, Y., Yazaki, K., Yokoyama, R., Yoshitake, Y., Yotsui, I., Zachgo, S., and Schmutz, J. (2017) Insights into land plant evolution garnered from the Marchantia polymorpha genome. Cell,, 171, 287-304.
    http://www.sciencedirect.com/science/article/pii/S0092867417311248
    Peterson, J., Inoue, S., Kelly, S. M., Sullivan, S., Kinoshita, T., *Christie, J. M. (2017) Functional characterization of a constitutively active kinase variant of Arabidopsis phototropin 1. J. Biol. Chem., 292, 13843-13852.
    http://www.jbc.org/content/292/33/13843
    *Inoue, S., Iwashita, N., Takahashi, Y., Gotoh, E., Okuma, E., Hayashi, M., Tabata, R., Takemiya, A., Murata, Y., Doi, M., Kinoshita, T., *Shimazaki, K. (2017) Brassinosteroid involvement in Arabidopsis thaliana stomatal opening. Plant Cell Physiol., 58, 1048-1058.
    https://academic.oup.com/pcp/article-lookup/doi/10.1093/pcp/pcx049
    Wang, Y. and *Kinoshita, T. (2017) Measurement of stomatal conductance in rice. Bio-protocol, 7, e2226 (6 pages).
    http://www.bio-protocol.org/e2226
    *Nakamura, A., Tochio, N., Fujioka, S., Ito, S., Kigawa, T,. Shimada, Y., Matsuoka, M., Yoshida, S., Kinoshita, T., Asami, T., Seto, H., Nakano, T. (2017) Molecular actions of two synthetic brassinosteroids, iso-carbaBL and 6-deoxoBL, which cause altered physiological activities between Arabidopsis and rice. PLoS ONE, 12, e0174015 (16 pages).
    http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0174015
    Hayashi, M., Inoue, S., Ueno, Y., Kinoshita, T. (2017) A Raf-like protein kinase BHP mediates blue light-dependent stomatal opening. Sci. Rep., 7, 45586 (12 pages).
    https://www.nature.com/articles/srep45586
    Joo, S., Nishimura, Y., Cronmiller, E., Hong, R. H., Kariyawasam, T., Wang, M. H., Shao, N. C., Akkad, S. E., Suzuki, T., Higashiyama, T., Jin, E., Lee, J. H. (2017) Gene regulatory networks for the haploid-to-diploid transition of Chlamydomonas reinhardtii. Plant Physiol., 175, 314-332.
    http://www.plantphysiol.org/content/175/1/314
    総説論文
    Inoue, S. and Kinoshita, T. (2017) Blue light regulation of stomatal opening and the plasma membrane H+-ATPase. Plant Physiol., 174, 531-538.
    http://www.plantphysiol.org/content/174/2/531
    日本語著書・解説
    木下俊則、高橋宏二(2017)水と植物細胞、テイツ/ザイガー植物生理学・発生学 原著第6版(講談社サイエンティフィック)第3章、85-99.
    木下俊則、高橋宏二(2017)植物における水収支、テイツ/ザイガー植物生理学・発生学 原著第6版(講談社サイエンティフィック)第4章、101-119.
    新聞ネット記事・テレビ報道
    日経新聞(2017年7月6日)農作物の開花早める化合物 名大が開発、寒冷地でも収穫安定
    Nikkei Asian Review(2017年7月6日)Nagoya University scientists develop compound that hastens flowering
    https://asia.nikkei.com/Tech-Science/Science/Nagoya-University-scientists-develop-compound-that-hastens-flowering
    日刊工業新聞(2017年4月13日)植物の気孔開口に不可欠 たんぱく質を発見 名大
    日経産業新聞(2017年4月11日)気孔を閉じる仕組み判明 名大 乾燥に強くする薬品に道
    化学工業日報(2017年4月10日)名大―龍谷大 植物の気孔開く分子発見 乾燥耐性作物開発に道
    日本の研究.com(2017年4月5日)気孔開口の鍵因子を発見 ~農作物の乾燥耐性や成長を制御する新たな技術開発に期待~
    https://research-er.jp/articles/view/57142
  • -2016年-
    原著論文
    Okumura, M. and *Kinoshita, T. (2016) Measurement of ATP hydrolytic activity of plasma membrane H+-ATPase from Arabidopsis thaliana leaves. Bio-protocol, 6, e2044 (7 pages).
    http://www.bio-protocol.org/e2044
    Inoue, S., Takahashi, K., Okumura, H. N., and Kinoshita, T. (2016) Auxin influx carrier AUX1 confers acid resistance for Arabidopsis root elongation through the regulation of plasma membrane H+-ATPase. Plant Cell Physiol., 57, 2194-2201.
    http://pcp.oxfordjournals.org/content/early/2016/08/08/pcp.pcw136
    *Uehara, K. B., *Wang, D. R., Furuta, T., Minami, A., Nagai, K., Gamuyao,R., Asano, K., Angeles-Shim, R. B., Shimizu, Y., Ayano, M., Komeda, N., Doi, K., Miura, K., Toda, Y., Kinoshita, T., Okuda, S., Higashiyama, T., Nomoto, M., Tada, Y., Shinohara, H., Matsubayashi, Y., Greenberg, A., Wu, J., Yasui, H., Yoshimura, A., Mori, H., McCouch, S. R., and Ashikari, M. (2016) Loss of function at RAE2, a previously unidentified EPFL, is required for awnlessness in cultivated Asian rice, Proc. Natl. Acad. Sci. U.S.A., 113, 8969-8974.
    http://www.pnas.org/content/113/32/8969
    Aleman, F., Yazaki, J., Lee, M., Takahashi, Y., Kim, A. Y., Kinoshita, T., Ecker, JR., and Schroeder, J. I. (2016) An ABA-increased interaction of the PYL6 ABA receptor with MYC2 transcription factor: A putative link of ABA and JA signaling. Sci. Rep., 6, 28941 (10 pages).
    http://www.nature.com/articles/srep28941
    Yamauchi S, Takemiya A, Sakamoto T, Kurata T, Kinoshita, T. , and Shimazaki K. (2016) The plasma membrane H+-ATPase AHA1 plays a major role in stomatal opening in response to blue light. Plant Physiol., 171, 2731-43.
    http://www.plantphysiol.org/content/171/4/2731
    Takahashi Y, Kinoshita, T., Matsumoto M, and Shimazaki K. (2016) Inhibition of the Arabidopsis bHLH transcription factor by monomerization through abscisic acid-induced phosphorylation. Plant Journal, 87, 559-67.
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.13217/abstract
    Toda Y, Wang Y, Takahashi A, Kawai Y, Tada Y., Yamaji N, Ma J. F, Ashikari M, Kinoshita, T. (2016) Oryza sativa H+-ATPase (OSA) is involved in the regulation of dumbbell-shaped guard cells of rice. Plant Cell Physiol., 57, 1220-1230.
    http://pcp.oxfordjournals.org/content/57/6/1220
    Okumura M, Inoue S, Kuwata K, Kinoshita, T. (2016) Photosynthesis activates plasma membrane H+-ATPase via sugar accumulation. Plant Physiol., 171, 580-589.
    http://www.plantphysiol.org/content/171/1/580
    Nakamichi, N., Takao S, Kudo T, Kiba T, Wang Y, Kinoshita, T. , Sakakibara H. (2016) Improvement of Arabidopsis biomass and cold, drought, and salinity stress tolerance by modified circadian clock-associated PSEUDO-RESPONSE REGULATORs. Plant Cell Physiol., 57, 1085-1097.
    http://pcp.oxfordjournals.org/content/57/5/1085
    Nagatoshi Y, Mitsuda N, Hayashi M, Inoue S, Okuma E, Kubo A, Murata Y, Seo M, Saji H, Kinoshita, T., Ohme-Takagi M. (2016) GOLDEN 2-LIKE transcription factors for chloroplast development affect ozone tolerance through the regulation of stomatal movement. Proc. Natl. Acad. Sci. U.S.A., 113, 4218-4223.
    http://www.pnas.org/content/113/15/4218.abstract
    Kamioka, M., Takao, S., Suzuki, T., Taki, K., Higashiyama, T., Kinoshita, T. and *Nakamichi, N. (2016) Direct repression of evening genes by CIRCADIAN CLOCK-ASSOCIATED 1 in Arabidopsis circadian clock. Plant Cell, 28, 696-711.
    http://www.plantcell.org/content/28/3/696.short
    Yamada, K., Yamaguchi, K., Shirakawa, T., Nakagami, H., Mine, A., Ishikawa, K., Fujiwara, M., Narusaka, M., Narusaka, Y., Ichimura, K., Kobayashi, Y., Matsui, H., Nomura, Y., Nomoto, M., Tada, Y., Fukamizo, T., Tsuda, K., Shirasu, K., Shibuya, N., and *Kawasaki, T. (2016) The Arabidopsis CERK1-associated kinase PBL27 connects chitin perception to MAPK activation. EMBO J., 35, 2468-2483.
    http://emboj.embopress.org/content/35/22/2468
    Hayami, N., Kimura, M., Tokizawa, M., Iuchi, S., Kurihara, Y., Matsui, M., Nomoto, M., Tada, Y., Sakai, Y., and *Yamamoto, Y.Y. (2016) The responses of Arabidopsis Early Light-Induced Protein to ultraviolet B, high light, and cold stress are regulated by a transcriptional regulatory unit composed of two elements. Plant Physiol., 169, 840-855.
    http://www.plantphysiol.org/content/169/1/840
    Inoue, K., Nishihama, R., Kataoka, H., Hosaka, M., Manabe, R., Nomoto, M., Tada, Y., Ishizaki, K., and Kohchi, T. (2016) Phytochrome signaling is mediated by PHYTOCHROME INTERACTING FACTOR in the liverwort Marchantia polymorpha. Plant Cell, 28, 1406-1421.
    http://www.plantcell.org/content/28/6/1406
    *Fujii, S., Suzuki, T., Giegé, P., Higashiyama, T., Koizuka, N., Shikanai, T. (2016) The Restorer-of-fertility-like 2 pentatricopeptide repeat protein and RNase P are required for the processing of mitochondrial orf291 RNA in Arabidopsis. Plant J. , 86, 504-513.
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.13185/abstract
    *Kasahara, R. D., Notaguchi, M., Nagahara, S., Suzuki, T., Susaki, D., Honma, Y., Maruyama, D., Higashiyama, T. (2016) Pollen tube contents initiate ovule enlargement and enhance seed coat development without fertilization. Sci. Adv., 2, e1600554 (7 pages).
    http://advances.sciencemag.org/content/2/10/e1600554
    Kozgunova, E., Suzuki, T., Higashiyama, T., and *Kurihara, D. (2016) Haspin has multiple functions in the plant cell division regulatory network. Plant Cell Physiol., 57, 848-861.
    https://academic.oup.com/pcp/article/57/4/848/2461067
    Kanamori, A., Sugita, Y., Yuasa, Y., Suzuki, T., Kawamura, K., Uno, Y., Kamimura, K., Matsuda, Y., Wilson, C. A., Amores, A., Postlethwait, J. H., Suga, K., *Sakakura, Y. (2016) A genetic map for the only self-fertilizing vertebrate. G3 (Bethesda), 6, 1095-1106.
    http://www.g3journal.org/content/6/4/1095
    Yoshida, A., Nakano, S., Suzuki, T., Ihara, K., Higashiyama, T., *Mori, I. (2016) A glial K+/Cl- cotransporter modifies temperature-evoked dynamics in Caenorhabditis elegans sensory neurons. Genes Brain Behav., 15, 429-440.
    http://onlinelibrary.wiley.com/doi/10.1111/gbb.12260/abstract
    Suzuki, T., Matsushima, C., Nishimura, S., Higashiyama, T., Sasabe, M., Machida, Y. (2016) Identification of Phosphoinositide-Binding Protein PATELLIN2 as a Substrate of Arabidopsis MPK4 MAP Kinase during Septum Formation in Cytokinesis. Plant Cell Physiol., 57, 1744-1755.
    https://academic.oup.com/pcp/article/57/8/1744/2755849/Identification-of-Phosphoinositide-Binding-Protein
    総説論文
    Takahashi, K. and Kinoshita, T. (2016) The regulation of plant cell expansion: Auxin-induced turgor-driven cell elongation. Molecular Cell Biology of the Growth and Differentiation of Plant Cells, 156-173. CRC Press.
    http://www.crcnetbase.com/doi/abs/10.1201/b20316-13
    日本語著書・解説
    木下俊則(2016)細胞膜、植物学の百科事典(丸善)392-393.
    木下俊則(2016)生体膜輸送系、植物学の百科事典(丸善)404-407.
    木下俊則、富山将和(2016)環境刺激による気孔開度制御機構の解明に向けて、BSJ-Review、7、97-109.
    木下俊則(2016)気孔の光開口運動における光シグナル伝達、光と生命の事典(朝倉書店)、140-141.
    萩原伸也、吉村柾彦、土屋雄一朗、木下俊則、伊丹健一郎(2016)魔女の雑草の呪いを解く分子、化学、71、35-39.
    新聞ネット記事・テレビ報道
    International Service for the Acquisition of Agri-biothech Applications(2016年6月23日)Japanese scientists develop super plants thru simple GM
    http://www.isaaa.org/kc/cropbiotechupdate/article/default.asp?ID=14519
    Global Plant Council (2016年4月6日)Plant's morning calls to prepare for the night
    http://www.globalplantcouncil.org/news-and-events/latest-news/plants-morning-calls-to-prepare-for-the-night
    Science Daily (2016年3月23日)Plant's morning calls to prepare for the night
    https://www.sciencedaily.com/releases/2016/03/160323082508.htm
    ScienMag(2016年3月23日)Plant's morning calls to prepare for the night
    https://scienmag.com/plants-morning-calls-to-prepare-for-the-night/
  • -2015年-
    原著論文
    *#Tsuchiya, Y., #Yoshimura, M., Sato, Y., Kuwata, K., Toh, S., Holbrook-Smith, D., Zhang, H., McCourt, P., Itami, K., Kinoshita, T., and *Hagihara, S. (2015) Probing strigolactone receptors in Striga hermonthica with fluorescence. Science, 349, 864-868. [プレスリリース] [新聞ネット記事]
    http://science.sciencemag.org/content/349/6250/864.full
    Kimura, Y., Aoki, S., Ando, E., Kitatsuji, A., Watanabe, A., Ohnishi, M., Takahashi, K., Inoue, S., Nakamichi, N., Tamada, Y., and *Kinoshita, T. (2015) A flowering integrator, SOC1, affects stomatal opening in Arabidopsis thaliana. Plant Cell Physiol., 56, 640-649.
    https://academic.oup.com/pcp/article/56/4/640/2756391
    *Tsuji, H., Tachibana, C., Tamaki, S., Taoka, K., Kyozuka, J., and Shimamoto, K. (2015) Hd3a promotes lateral branching in rice. Plant J., 82, 256-266.
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.12811/full
    Saleh, A., Withers, J., Mohan, R., Marques, J., Gu, Y., Yan, S., Zavaliev, R., Nomoto, M., Tada, Y., and *Dong, X. (2015) Posttranslational modifications of the master transcriptional regulator NPR1 enable dynamic but tight control of plant immune responses. Cell Host & Microbe, 18, 169-182.
    http://www.sciencedirect.com/science/article/pii/S1931312815002978
    Matsuo, M., Johnson, J. M., Hieno, A., Tokizawa, M., Nomoto, M., Tada, Y., Godfrey, R., Obokata, J., Sherameti, I., Yamamoto, Y. Y., Bohmer, F. D., and *Oelmuller, R. (2015) High REDOX RESPONSIVE TRANSCRIPTION FACTOR1 levels result in accumulation of reactive oxygen species in Arabidopsis thaliana shoots and roots. Mol. Plant, 8, 1253-1273.
    http://www.sciencedirect.com/science/article/pii/S1674205215001793
    *Tsukagoshi, H., Suzuki, T., Nishikawa, K., Agarie, S., Ishiguro, S., and Higashiyama, T. (2015) RNA-seq analysis of the response of the halophyte, Mesembryanthemum crystallinum (ice plant) to high salinity. PLoS ONE., 10, e0118339 (16 pages).
    http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0118339
    *Okamoto, S., Suzuki, T., Kawaguchi, M., Higashiyama, T., and Matsubayashi, Y. (2015) A comprehensive strategy for identifying long-distance mobile peptides in xylem sap. Plant J., 84, 611-620.
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.13015/full
    Schaap, P., Barrantes, I., Minx, P., Sasaki, N., Anderson, R. W., Bénard, M., Biggar, K. K., Buchler, N. E., Bundschuh, R., Chen, X., Fronick, C., Fulton, L., Golderer, G., Jahn, N., Knoop, V., Landweber, L.F., Maric, C., Miller, D., Noegel, A. A., Peace, R., Pierron, G., Sasaki, T., Schallenberg-Rüdinger, M., Schleicher, M., Singh, R., Spaller, T., Storey, K. B., Suzuki, T., Tomlinson, C., Tyson, J. J., Warren, W. C., Werner, E. R., Werner-Felmayer, G., Wilson, R. K., Winckler, T., Gott, J. M., Glöckner, G., *Marwan, W. (2015) The physarum polycephalum genome reveals extensive use of prokaryotic two-component and metazoan-type tyrosine kinase signaling. Genome Biol Evol., 8, 109-125.
    https://academic.oup.com/gbe/article/8/1/109/2574153
    *Notaguchi, M., Higashiyama, T., and Suzuki, T. (2015) Identification of mRNAs that move over long distances using an RNA-Seq analysis of Arabidopsis/Nicotiana benthamiana heterografts. Plant Cell Physiol. , 56, 311-321.
    https://academic.oup.com/pcp/article-lookup/doi/10.1093/pcp/pcu210
    *Song, X. J., Kuroha, T., Ayano, M., Furuta, T., Nagai, K., Komeda, N., Segami, S., Miura, K., Ogawa, D., Kamura, T., Suzuki, T., Higashiyama, T., Yamasaki, M., Mori, H., Inukai, Y., Wu, J., Kitano, H., Sakakibara, H., *Jacobsen, S. E., *Ashikari, M. (2015) Rare allele of a previously unidentified histone H4 acetyltransferase enhances grain weight, yield, and plant biomass in rice. Proc. Natl. Acad. Sci. U.S.A., 112, 76-81.
    http://www.pnas.org/content/112/1/76.abstract
    Kobayashi, K., Suzuki, T., Iwata, E., Nakamichi, N., Suzuki, T., Chen, P., Ohtani, M., Ishida, T., Hosoya, H., Muller, S., Leviczky, T., Pettko-Szandtner, A., Darula, Z., Iwamoto, A., Nomoto, M., Tada, Y., Higashiyama, T., Demura, T., Doonan, J. H., Hauser, M. T., Sugimoto, K., Umeda, M., Magyar, Z., Bogre, L., and Ito, M. (2015) Transcriptional repression by MYB3R proteins regulates plant organ growth. EMBO J., 34, 1992-2007.
    http://onlinelibrary.wiley.com/doi/10.15252/embj.201490899/abstract
    総説論文
    Takahashi, Y. and Kinoshita, T. (2015) Stomatal function has an element of hysteresis.
    New Phytol., 205, 455-457.
    http://onlinelibrary.wiley.com/doi/10.1111/nph.13149/abstract
    *Satake, A., Sakurai, G., and *Kinoshita, T. (2015) Modeling strategies for plant survival, growth and reproduction. Plant Cell Physiol., 56, 583-585.
    https://academic.oup.com/pcp/article/56/4/583/2756513
    *Nakamichi, N. (2015) Adaptation to the local environment by modifications of the photoperiod response in crops. Plant Cell Physiol., 56, 594-604.
    https://academic.oup.com/pcp/article-lookup/doi/10.1093/pcp/pcu181
    日本語著書・解説
    Wang Yin、木下俊則(2015)気孔調節による植物のCO2コンダクタンス制御、光合成研究、25(3)(通巻74号)、194-201.
    木下俊則(2015)未来をつなぐ風、実験医学、33、2670-2671.
    木下俊則(2015)生き残りのための環境突破力、理フィロソフィア(名古屋大学理学部・大学院理学研究科広報誌)、29、8-11.
    木下俊則(2015)環境変動に対する気孔開閉制御、化学と生物、53、 608-613.
    プレスリリース
    アフリカの食糧問題に希望の光 ~ 寄生植物の発芽を制御するタンパク質を発見 ~ (2015年8月21日)
    http://www.itbm.nagoya-u.ac.jp/ja/research/2015/08/Yoshimulactone-Striga.php
    新聞ネット記事・テレビ報道
    中日新聞(日刊)(2015年8月21日)アフリカ有害植物 駆除に光
    読売新聞(2015年5月18日)「花咲かホルモン」(木下と辻の両方が取り上げられています。)
    JST サイエンスニュース・サイエンスチャンネル特集 2015年6月19日「花咲かホルモン」フロリゲン 植物ゲノム研究最前線(辻)
    ハーバービジネスオンライン 2015年12月19日 TPPで苦境に立たされた農業を開花ホルモン研究が救う?(辻)

松林班

  • -2017年-
    原著論文
    #Ohkubo, Y., #Tanaka, M., Tabata, R., Ohnishi, M. O. and *Matsubayashi, Y. (2017) Shoot-to-root mobile polypeptides involved in systemic regulation of nitrogen acquisition, Nature Plants, 3, 17029.
    http://www.nature.com/articles/nplants201729
    Hirakawa, Y., Shinohara, H., Welke, K., Irle, S., Matsubayashi, Y., *Torii, K. U. and *Uchida, N. (2017) Cryptic bioactivity capacitated by synthetic hybrid plant peptides. Nature Commun., 8, 14318 (7 pages).
    http://www.nature.com/articles/ncomms14318
    #Nakayama, T., #Shinohara, H., Tanaka, M., Baba, K., Ohnishi, M. O. and *Matsubayashi, Y. (2017) A peptide hormone required for Casparian strip diffusion-barrier formation in Arabidopsis roots, Science, 355, 284-286.
    http://science.sciencemag.org/content/355/6322/284.full
    Kanadome, T., *Shibata,H., Kuwata, K, Takahara, T., and Maki, M. (2017) The calcium-binding protein ALG-2 promotes endoplasmic reticulum exit site localization and polymerization of Trk-fused gene (TFG) protein. FEBS J., 284, 56-76.
    http://onlinelibrary.wiley.com/doi/10.1111/febs.13949/full
    Yamada,T., Tahara,E., Kanke, M., Kuwata, K, and *Nishiyama, T. (2017) Drosophila Dalmatian combines sororin and shugoshin roles in establishment and protection of cohesion. EMBO J., 36, 1513-1527.
    http://emboj.embopress.org/content/36/11/1513
  • -2016年-
    原著論文
    *Uehara, K. B., *Wang, D. R., Furuta, T., Minami, A., Nagai, K., Gamuyao,R., Asano, K., Angeles-Shim, R. B., Shimizu, Y., Ayano, M., Komeda, N., Doi, K., Miura, K., Toda, Y., Kinoshita, T., Okuda, S., Higashiyama, T., Nomoto, M., Tada, Y., Shinohara, H., Matsubayashi, Y., Greenberg, A., Wu, J., Yasui, H., Yoshimura, A., Mori, H., McCouch, S. R., and Ashikari, M. (2016) Loss of function at RAE2, a previously unidentified EPFL, is required for awnlessness in cultivated Asian rice, Proc. Natl. Acad. Sci. U.S.A., 113, 8969-8974.
    http://www.pnas.org/content/early/2016/07/26/1604849113
    Shinohara, H., Mori, A., Yasue, N., Sumida, K. and *Matsubayashi, Y. (2016) Identification of three LRR-RKs involved in perception of root meristem growth factor in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A., 113, 3897-3902.
    http://www.pnas.org/content/113/14/3897.long
    Okumura M, Inoue S, Kuwata K, Kinoshita, T. (2016) Photosynthesis activates plasma membrane H+-ATPase via sugar accumulation. Plant Physiol., 171, 580-589.
    http://www.plantphysiol.org/content/171/1/580
    Fujimoto, S., Sugano, S. S., Kuwata, K., Osakabe, K and *Matsunaga, S. (2016) Visualization of specific repetitive genomic sequences with fluorescent TALEs in Arabidopsis thaliana. J. Exp. Bot., 67, 6101-6110.
    http://jxb.oxfordjournals.org/content/67/21/6101.full
    日本語著書・解説
    松林嘉克 (2016) 植物ホルモン ペプチドホルモン、370-373、植物学の百科事典
  • -2015年-
    原著論文
    Xu, C., Liberatore, K. L., MacAlister, C. A., Huang, Z., Chu, Y. H., Jiang, K., Brooks, C., Ogawa-Ohnishi, M., Xiong, G., Pauly, M., Van Eck, J., Matsubayashi, Y., van der Knaap, E., and *Lippman, Z. B. (2015) A cascade of arabinosyltransferases controls shoot meristem size in tomato. Nature Genet. 47, 784-792.
    http://www.nature.com/ng/journal/v47/n7/abs/ng.3309.html?lang=en
    Wu, T., Kamiya, T., Yumoto, H., Sotta, N., Katsushi, Y., Shigenobu, S., Matsubayashi, Y., and *Fujiwara, T. (2015) An Arabidopsis thaliana copper-sensitive mutant suggests a role of phytosulfokine in ethylene production. J. Exp. Bot. 66, 3657-3667.
    https://academic.oup.com/jxb/article/66/13/3657/513140
    *Shinohara, H., and Matsubayashi, Y. (2015) Reevaluation of the CLV3-receptor interaction in the shoot apical meristem: dissection of the CLV3 signaling pathway from a direct ligand-binding point of view. Plant J., 82, 328-336.
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.12817/full
    Ogawa-Ohnishi, M., and *Matsubayashi, Y. (2015) Identification of three potent hydroxyproline O-galactosyltransferases in Arabidopsis. Plant J., 81, 736-746.
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.12764/full
    *#Tsuchiya Y., #Yoshimura, M., Sato, Y., Kuwata, K., Toh, S., Holbrook-Smith, D., Zhang, H., McCourt, P., Itami, K., Kinoshita, T., and *Hagihara, S. (2015) Probing strigolactone receptors in Striga hermonthica with fluorescence. Science, 349, 864-868.
    http://www.sciencemag.org/content/349/6250/864.abstract
    日本語著書・解説
    小川・大西真理、松林嘉克 (2015) 古くて新しい植物のO ― 結合型糖タンパク質の世界、化学と生物、53、729-730.
    田畑 亮、松林嘉克 (2015) 効率的な窒素栄養吸収を可能にする根-葉-根間長距離シグナル伝達、バイオインダストリー、32、53-58.

松永班

杉本班

福田班

  • -2019年-
    原著論文
    *#Endo, S., #Iwai, Y., and *Fukuda, H. (2019) Cargo‐dependent and cell wall‐associated xylem transport in Arabidopsis. New Phytol., 222, 159-170.
    https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.15540
    #Sugiyama, Y., #Nagashima, Y., Wakazaki, M., Sato, M., Toyooka, K., Fukuda, H., and *Oda, Y. (2019) A Rho-actin signaling pathway shapes cell wall boundaries in Arabidopsis xylem vessels. Nature Commun., 10, 468 (10 pages).
    https://www.nature.com/articles/s41467-019-08396-7
    総説論文
    *Fukuda, H. and Ohashi-Ito, K. (2019) Vascular tissue development in plants. Curr. Top. Dev. Biol., 131, 141-160.
    https://doi.org/10.1016/bs.ctdb.2018.10.005
  • -2018年-
    原著論文
    *Betsuyaku, S., Katou, S., Takebayashi, Y., Sakakibara, H., Nomura, N., and Fukuda, H. (2018) Salicylic acid and jasmonic acid pathways are activated in spatially different domains around the infection site during effector-triggered immunity in Arabidopsis thaliana. Plant Cell Physiol., 59, 8-16.
    https://academic.oup.com/pcp/article/59/1/8/4644744
    *Saito, M., Kondo, Y., and *Fukuda, H. (2018) BES1 and BZR1 redundantly promote phloem and xylem differentiation. Plant Cell Physiol., 59, 590-600.
    https://academic.oup.com/pcp/article/59/3/590/4827626
    Yamazaki, K., *Kondo, Y., Kojima, M., Takebayashi, Y., Sakakibara, H., and *Fukuda, H. (2018) Suppression of DELLA signaling induces procambial cell formation in culture. Plant J., 94, 48-59.
    https://onlinelibrary.wiley.com/doi/full/10.1111/tpj.13840
    *Ohashi-Ito, K., Iwamoto, K., and *Fukuda, H. (2018) LOB DOMAIN-CONTAINING PROTEIN 15 positively regulates expression of VND7, a master regulator of tracheary elements. Plant Cell Physiol., 59, 989-996.
    https://academic.oup.com/pcp/article/59/5/989/4850576
    Nagashima, Y., Tsugawa, S., Mochizuki, A., Sasaki, T., Fukuda, H., and *Oda, Y. (2018) A Rho-based reaction-diffusion system governs cell wall patterning in metaxylem vessels. Sci. Rep., 8, 11542 (17 pages). [プレスリリース]
    https://www.nature.com/articles/s41598-018-29543-y
    *Endo, S., Iwamoto, K., and *Fukuda, H. (2018) Overexpression and cosuppression of xylem-related genes in an early xylem differentiation stage-specific manner by the AtTED4 promoter. Plant Biotechnol. J., 16, 451-458.
    http://onlinelibrary.wiley.com/doi/10.1111/pbi.12784/full
    Yoo, C.-M., Naramoto, S., Sparks, J. A., Khan, B. R., Nakashima, J., Fukuda, H., and *Blancaflor, E. B. (2018) Deletion analysis of AGD1 reveals domains crucial for its plasma membrane recruitment and function in root hair polarity. J. Cell Sci., 131, 1-13.
    http://jcs.biologists.org/content/131/2/jcs203828
    *Takahashi, F., Suzuki, T., Osakabe, Y., Betsuyaku, S., Kondo, Y., Dohmae, N., Fukuda, H., Yamaguchi-Shinozaki, K., and *Shinozaki, K. (2018) A small peptide modulates stomatal control via abscisic acid in long-distance signaling. Nature, 556, 235-238.
    https://www.nature.com/articles/s41586-018-0009-2
    総説論文
    Nurani, A. M., Kondo, Y., and Fukuda, H. (2018) Ectopic vascular induction in Arabidopsis cotyledons for sequential analysis of phloem differentiation. Methods Mol. Biol., 1830, 149-159.
    https://link.springer.com/protocol/10.1007%2F978-1-4939-8657-6_10
    プレスリリース
    植物の水の通り道を自在に制御する (2018年8月28日)
    http://www.s.u-tokyo.ac.jp/ja/press/2018/6016/
  • -2017年-
    原著論文
    Guo, X., Wang, J., Gardner, M., Fukuda, H., Kondo, Y., Etchells, J. P., Wang, X., and Mitchum, M. G. (2017) Identification of cyst nematode B-type CLE peptides and modulation of the vascular stem cell pathway for feeding cell formation. PLOS Pathog., 13, e1006142 (19 pages).
    http://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1006142
    Sugiyama, Y., Wakazaki, M., Toyooka, K., Fukuda, H. and *Oda, Y. (2017) A novel plasma membrane-anchored protein regulates wood cell-wall deposition through microtubule-dependent lateral inhibition of Rho GTPase domains. Curr. Biol., 27, 2522-2528.
    https://www.sciencedirect.com/science/article/pii/S0960982217307960
    Inoue, K., Araki, T., *Endo, M. (2017) Integration of input signals into the gene network in the plant circadian clock. Plant Cell Physiol., 58, 977-982.
    https://academic.oup.com/pcp/article/58/6/977/3811177/Integration-of-Input-Signals-into-the-Gene-Network
    英語著書
    Saito, M., Nurani, A. M., Kondo, Y., and Fukuda, H. (2017) Tissue culture of xylem differentiation with Arabidopsis leaves. In “Xylem-Methods and Protocols” edited by de Lucas, M. and Etchells, J. P. Humana press, 59-65.
  • -2016年-
    原著論文
    *Kondo, Y., Nurani, A.M., Saito, C., Ichihashi,Y., Saito, M., Yamazaki, K., Mitsuda, N., Ohme-Takagi, M., and *Fukuda, H. (2016) Vascular cell Induction culture System Using Arabidopsis Leaves (VISUAL) visualizes the sequential differentiation of sieve element-like cells. Plant Cell, 28, 1250-1262. [プレスリリース]
    http://www.plantcell.org/content/early/2016/05/18/tpc.16.00027.abstract
    *Doi, H., Chinen, A., Fukuda, H., Usuda, Y. (2016) Vibrio algivorus sp. nov., an alginate and agarose assimilating bacterium isolated from the gut flora of a turban shell marine snail. Int. J. Syst. Evol. Micr., 66, 3164-3169.
    http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.001165
    Inada, N., Betsuyaku, S., Shimada, T., Ebine, K., Ito, E., Kutsuna, N., Hasezawa, S., Takano, Y., and Fukuda, H., Nakano, A. and *Ueda, T. (2016) Modulation of plant RAB GTPase-mediated membrane trafficking pathway at the interface between plants and obligate biotrophic pathogens. Plant Cell Physiol., 57, 1854-1864. [Editor-in-chief's choice]
    https://academic.oup.com/pcp/article/57/9/1854/2223160
    Morita, J., Kato, K., Nakane, T., Kondo, Y., Fukuda, H., Nishimasu, H., *Ishitani R., and *Nureki, O. (2016) Crystal structure of the plant receptor-like kinase TDR in complex with the TDIF peptide. Nature Commun., 7, 12383 (9 pages). [プレスリリース]
    http://www.nature.com/ncomms/2016/160808/ncomms12383/full/ncomms12383.html
    *Naramoto, S., Dainobu, T., Tokunaga, H., Kyozuka, J. and Fukuda, H. (2016) Cellular and developmental function of ACAP type ARF-GAP proteins are diverged in plant cells. Plant Biotechnology, 33, 309-314.
    https://www.jstage.jst.go.jp/article/plantbiotechnology/33/4/33_16.0309a/_article
    Tazoe, Y., Sazuka, T., Yamaguchi, M., Saito, C., Ikeuchi, M., Kanno, K., Kojima, S., Hirano, K., Kitano, H., Kasuga, S., Endo, T., Fukuda, H., and *Makino, A. (2016) Growth properties and biomass production in the hybrid C4 crop sorghum bicolor. Plant Cell Physiol., 57, 944-952.
    https://academic.oup.com/pcp/article/57/5/944/2223176
    Zeng, J., Ding, Q., Fukuda, H., and *He, X.-Q. (2016) Fertilization Independent Endosperm genes repress NbGH3.6 and regulate the auxin level during shoot development in Nicotiana benthamiana. J. Exp. Bot., 67, 2207-2217.
    http://jxb.oxfordjournals.org/content/67/8/2207
    Endo, M., Shimizu, H., and Araki, T. (2016) Rapid and simple isolation of vascular, epidermal and mesophyll cells from plant leaf tissue. Nature Protocols, 11, 1388-1395.
    http://www.nature.com/nprot/journal/v11/n8/abs/nprot.2016.083.html
    Shimizu, H., Torii, K., Araki, T., and *Endo, M., (2016) Importance of epidermal clocks for regulation of hypocotyl elongation through PIF4 and IAA29. Plant Signal. Behav., 11, e1143999 (3 pages).
    https://www.tandfonline.com/doi/full/10.1080/15592324.2016.1143999
    Higo, A., Niwa, M., Yamato, K. T., Yamada, L., Sawada, H., Sakamoto, T., Kurata, T., Shirakawa, M., Endo, M., Shigenobu, S., Yamaguchi, K., Ishizaki, K., Nishihama, R., Kohchi, T. and *Araki, T. (2016) Transcriptional framework of male gametogenesis in the liverwort Marchantia polymorpha L. Plant Cell Physiol., 57, 325-338.
    https://academic.oup.com/pcp/article/57/2/325/2461069
    Endo, M., Araki, T., and *Nagatani, A. (2016) Tissue-specific regulation of flowering by photoreceptors. Cell Mol. Life Sci., 73, 829-839.
    https://link.springer.com/article/10.1007%2Fs00018-015-2095-8
    総説論文
    Fukuda, H. (2016) Signaling, transcriptional regulation, and asynchronous pattern formation governing plant xylem development. Proc. Japan Acad. Series B, 92, 98-107.
    https://www.jstage.jst.go.jp/article/pjab/92/3/92_PJA9203B-02/_article
    *Ohashi, I. K. and Fukuda, H. (2016) Functional mechanism of bHLH complexes during early vascular development. Curr. Opin. Plant Biol., 33, 42-47.
    http://www.sciencedirect.com/science/article/pii/S1369526616300863
    *Endo, M. (2016) Tissue-specific circadian clocks in plants. Curr. Opin. Plant Biol., 29, 44-49.
    http://www.sciencedirect.com/science/article/pii/S1369526615001727
    日本語著書・解説
    *福田裕穂、近藤侑貴、小澤靖子、岩本訓知,小田祥久 (2016) 木部細胞分化誘導、植物細胞壁実験法(石井忠他編)、弘前大学出版会、221-229.
    東京大学生命科学教科書編集委員会編 (2016) 演習で学ぶ生命科学-物理・化学・数理からみる生命科学入門、203.
    *福田裕穂 (2016) 学問ってスゴイ、維管束細胞の研究、My Vision、2016(2) 6-7.
    *福田裕穂 (2016) 理学への招待 II-理学の楽しみ-、教養学部報、583、5-6.
    *福田裕穂 (2016) 理学部の魅力って何?-「無から問いをつくる力」、それは失敗の繰り返しから-、蛍雪時代8月号付録, 全国大学理学部・工学部系統の総合的研究、16-18.
    古藤 知子、清水 華子、遠藤求 (2016) 植物における非集中型の概日時計システム、化学と生物、54(7) 461-463.
    遠藤求 (2016) 植物の体内時計はどこにある?、じっきょう理科資料、78、1.
    プレスリリース
    植物のホルモンTDIFとその受容体TDRの複合体の「かたち」を解明 (2016年8月8日)
    http://www.s.u-tokyo.ac.jp/ja/info/4979/
    維管束の細胞を作り出す方法“VISUAL”の開発 (2016年5月20日)
    http://www.s.u-tokyo.ac.jp/ja/press/2016/4689/
    新聞ネット記事・テレビ報道
    日経産業新聞(2016年5月24日)篩管細胞、葉で増殖。栄養運搬、仕組み解明に道。東大が技術
    科学新聞(2016年7月15日)ゴットフリード・ワグネル賞 -3部門で若手研究者3氏に-
  • -2015年-
    原著論文
    Kawamoto, N., Endo, M., and *Araki, T. (2015) Expression of a kinase-dead form of CPK33 involved in florigen complex formation causes delayed flowering. Plant Signal. Behav., 10, e1086856, (2 pages).
    https://www.tandfonline.com/doi/full/10.1080/15592324.2015.1086856
    Shimizu, H., Katayama, K., Koto, T., Torii, K., Araki, T., and Endo, M. (2015) Decentralized circadian clocks process thermal and photoperiodic cues in specific tissues. Nature Plants, 1, 15163.
    http://www.nature.com/articles/nplants2015163
    Katayama, H., Iwamoto, K., Kariya, Y., Asakawa, T., Kan, T., Fukuda, H., and Ohashi-Ito, K. (2015) A negative feedback loop controlling bHLH complexes is involved in vascular cell division and differentiation in the root apical meristem. Curr. Biol. 25, 3144-3150.
    http://www.cell.com/current-biology/abstract/S0960-9822(15)01345-7
    Shinohara, N., Kakegawa, K., and Fukuda, H. (2015) Monoclonal antibody-based analysis of cell wall remodeling during xylogenesis. J. Plant Res. 128, 975-986.
    https://link.springer.com/article/10.1007%2Fs10265-015-0758-z
    Kondo, Y., Fujita, T., Sugiyama, M., and Fukuda, H. (2015) A novel system for xylem cell differentiation in Arabidopsis thaliana. Mol. Plant, 8, 612-621.
    http://www.sciencedirect.com/science/article/pii/S1674205214000264
    Shimizu, H., Araki, T. and *Endo, M. (2015) Photoperiod sensitivity of the Arabidopsis circadian clock is tissue-specific. Plant Signal. Behav.,. 10, e1010933 (3 pages).
    http://www.tandfonline.com/doi/abs/10.1080/15592324.2015.1010933#.Vd_rJdwVjoo
    Kawamoto, N., Sasabe, M., Endo, M., Machida, Y., and *Araki, T. (2015) Calcium-dependent protein kinases responsible for the phosphorylation of a bZIP transcription factor FD crucial for the florigen complex formation. Sci. Rep., 5, 8341 (9 pages).
    https://www.nature.com/articles/srep08341
    総説論文
    Kondo, Y. and Fukuda, H. (2015) The TDIF signaling network. Curr. Opin. Plant. Biol., 28, 106-10.
    http://www.sciencedirect.com/science/article/pii/S1369526615001508
    新聞ネット記事・テレビ報道
    Nature Plants, News & Views. 2015年11月「Who knows where the time goes.」
    京都新聞 2015年11月3日「植物 組織ごとに体内時計、京大グループ解明 成長制御 技術に光」
    JST サイエンスポータル 2015年12月14日「存戦略を反映? 動物と違う植物の体内時 計 - 動物には指揮者が1 人、植物にはあちこちに ?」

篠崎班

  • -2018年-
    原著論文
    Mizoi, J., Kanazawa, N., Kidokoro, S., Takahashi, F., Qin, F., Morimoto, K., Shinozaki, K., and *Yamaguchi-Shinozaki, K. (2018) Heat-induced inhibition of phosphorylation of the stress-protective transcription factor DREB2A promotes thermotolerance of Arabidopsis thaliana. J. Biol. Chem., in press.
    http://www.jbc.org/content/early/2018/11/28/jbc.RA118.002662
    Sato, H., Takasaki, H., Takahashi, F., Suzuki, T., Iuchi, S., Mitsuda, N., Ohme-Takagi, M., Ikeda, M., Seo, M., Yamaguchi-Shinozaki, K., and *Shinozaki, K. (2018) Arabidopsis thaliana NGATHA1 transcription factor induces ABA biosynthesis by activating NCED3 gene during dehydration stress. Proc. Natl. Acad. Sci. U.S.A., 115, E11178-E11187.
    http://www.pnas.org/content/115/47/E11178.full
    Kudo, M., Kidokoro, S., Yoshida, T., Mizoi, J., Kojima, M., Takebayashi, Y., Sakakibara, H., Fernie, A. R., and *Yamaguchi-Shinozaki, K. (2018) A gene-stacking approach to overcome the trade-off between drought stress tolerance and growth in Arabidopsis. Plant J., in press. [プレスリリース][新聞ネット記事]
    https://onlinelibrary.wiley.com/doi/abs/10.1111/tpj.14110
    Kim, J. S., Yamaguchi-Shinozaki, K., and *Shinozaki, K. (2018) ER-anchored transcription factors bZIP17 and bZIP28 regulate root elongation. Plant Physiol., 176, 2221-2230.
    http://www.plantphysiol.org/content/176/3/2221.long
    *Takahashi, F., Suzuki, T., Osakabe, Y., Betsuyaku, S., Kondo, Y., Dohmae, N., Fukuda, H., Yamaguchi-Shinozaki, K., and *Shinozaki, K. (2018) A small peptide modulates stomatal control via abscisic acid in long-distance signaling. Nature, 556, 235-238.
    https://www.nature.com/articles/s41586-018-0009-2
    プレスリリース
    バイオマス生産性を向上させた環境ストレス耐性植物の開発-干ばつや寒波による作物の減収の改善に期待-(2018年10月4日)
    http://www.a.u-tokyo.ac.jp/topics/2018/20181004-1.html
    新聞ネット記事・テレビ報道
    中日新聞(2018年10月4日)過酷環境、耐える遺伝子
    東京新聞(2018年10月1日)過酷環境、耐える遺伝子
  • -2017年-
    原著論文
    Yamada K, Osakabe Y, *Yamaguchi-Shinozaki K (2017) A C-terminal motif contributes to the plasma membrane localization of Arabidopsis STP transporters. PLOS ONE, 12, e0186326 (13 pages).
    http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0186326
    #Morimoto K, #Ohama N, Kidokoro S, Mizoi J, Takahashi F, Todaka D, Mogami J, Sato H, Qin F, Kim JS, Fukao Y, Fujiwara M, Shinozaki K, *Yamaguchi-Shinozaki K. (2017) BPM-CUL3 E3 ligase modulates thermotolerance by facilitating negative regulatory domain-mediated degradation of DREB2A in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A., 114, E8528-E8536. [プレスリリース]
    http://www.pnas.org/content/114/40/E8528.full
    #Sakuraba Y, #Kim EY, Han SH, Piao W, An G, Todaka D, Yamaguchi-Shinozaki K, *Paek NC. (2017) Rice Phytochrome-Interacting Factor-Like1 (OsPIL1) is involved in the promotion of chlorophyll biosynthesis through feed-forward regulatory loops. J. Exp. Bot., 68, 4103-4114.
    https://academic.oup.com/jxb/article/68/15/4103/3952689/Rice-PhytochromeInteracting-FactorLike1-OsPIL1-is
    Kidokoro S, Yoneda K, Takasaki H, Takahashi F, Shinozaki K, *Yamaguchi-Shinozaki K. (2017) Different cold-signaling pathways function in the responses to rapid and gradual decreases in temperature. Plant Cell, 29, 760-774.[プレスリリース]
    http://www.plantcell.org/content/29/4/760
    Todaka D, Zhao Y, Yoshida T, Kudo M, Kidokoro S, Mizoi J, Kodaira KS, Takebayashi Y, Kojima M, Sakakibara H, Toyooka K, Sato M, Fernie AR, Shinozaki K, *Yamaguchi-Shinozaki K. (2017) Temporal and spatial changes in gene expression, metabolite accumulation and phytohormone content in rice seedlings grown under drought stress conditions. Plant J., 90, 61-78.
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.13468/full
    Urano K, Maruyama K, Jikumaru Y, Kamiya Y, Yamaguchi-Shinozaki K, *Shinozaki K (2017) Analysis of plant hormone profiles in response to moderate dehydration stress. Plant J., 90, 17-36.
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.13460/full
    #Soma F, #Mogami J, Yoshida T, Abekura M, Takahashi F, Kidokoro S, Mizoi J, Shinozaki K, and *Yamaguchi-Shinozaki K. (2017) ABA-unresponsive SnRK2 protein kinases regulate mRNA decay under osmotic stress in plants, Nature Plants, 3, 16204. [プレスリリース]
    http://www.nature.com/articles/nplants2016204
    *Maruyama K, Ogata T, Kanamori N, Yoshiwara K, Goto S, Yamamoto Y, Tokoro Y, Noda C, Takaki Y, Urawa H, Iuchi S, Urano K, Yoshida T, Sakurai T, Kojima M, Sakakibara H, Shinozaki K, and Yamaguchi-Shinozaki K. (2017) Design of an optimal promoter involved in the heat-induced transcriptional pathway in Arabidopsis, soybean, rice, and maize. Plant J., 89, 671-680. [プレスリリース]
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.13420/full
    Kudo M, Kidokoro S, Yoshida T, Mizoi J, Todaka D, Fernie A, Shinozaki K, and *Yamaguchi-Shinozaki K. (2017) Double overexpression of DREB and PIF transcription factors improves drought stress tolerance and cell elongation in transgenic plants. Plant Biotechnol. J., 15, 458-471.
    http://onlinelibrary.wiley.com/doi/10.1111/pbi.12644/full
    Masuta Y, Nozawa K, Takagi H, Yaegashi H, Tanaka K, Ito T, Saito H, Kobayashi H, Matsunaa W, Masuda S, Kato A, and *Ito H. (2017) Inducible transposition of a heat-activated retrotransposon in tissue culture. Plant cell physiol., 58, 375-384.
    https://academic.oup.com/pcp/article/58/2/375/2737549
    プレスリリース
    植物に乾燥・高温耐性を付与する転写因子DREB2Aが活性化する仕組みを解明 - 干ばつや高温に強い作物の開発に期待 -(2017年9月19日)
    http://www.a.u-tokyo.ac.jp/topics/2017/20170919-1.html
    植物は2つの異なる応答機構によって低温ストレスに対する耐性を獲得している(2017年3月27日)
    http://www.a.u-tokyo.ac.jp/topics/2017/20170330-2.html
    植物の水分欠乏時の成長促進機構の発見 -作物の乾燥や塩ストレス時の成長や収穫を向上させる技術開発への貢献に期待-(2017年1月11日)
    新聞ネット記事・テレビ報道
    化学工業日報(2017年9月19日)植物転写因子DREB2A 東大など 活性化の仕組み解明 乾燥・高温耐性応用へ
    日経産業新聞(2017年1月12日)乾燥に強い植物解明 東大など
    日経バイオテク電子版(2017年1月12日)国立大学法人東京大学、植物の水分欠乏時の成長促進機構の発見
    https://bio.nikkeibp.co.jp/atcl/release/17/01/12/03330/
    日本工業新聞(2017年1月9日)東大、植物の水分欠乏時に成長促す仕組み発見
    日本経済新聞(2017年1月7日)東大と理研、植物の水分欠乏時の成長促進機構を発見
  • -2016年-
    原著論文
    Shimazaki T, Endo T, Kasuga M, Yamaguchi-Shinozaki K, Watanabe KN, *Kikuchi A. (2016) Evaluation of the yield of abiotic-stress-tolerant AtDREB1A transgenic potato under saline conditions in advance of field trials. Breed. Sci., 66, 703-710.
    https://www.jstage.jst.go.jp/article/jsbbs/66/5/66_16054/_html
    Honna PT, Fuganti-Pagliarini R, Ferreira LC, Molinari MDC, Marin SRR, de Oliveira MCN, Farias JRB, Neumaier N, Mertz-Henning LM, Kanamori N, Nakashima K, Takasaki H, Urano K, Shinozaki K, Yamaguchi-Shinozaki K, Desidério JA, and *Nepomuceno AL.(2016)Molecular, physiological, and agronomical characterization, in greenhouse and in field conditions, of soybean plants genetically modified with AtGolS2 gene for drought tolerance. Mol. Breed., 36, 157 (17 pages).
    http://link.springer.com/article/10.1007/s11032-016-0570-z
    Sato H, Todaka D, Kudo M, Mizoi J, Kidokoro S, Zhao Y, Shinozaki K, and *Yamaguchi-Shinozaki K. (2016) The Arabidopsis transcriptional regulator DPB3-1 enhances heat stress tolerance without growth retardation in rice. Plant Biotechnol. J., 14, 1756-1767. [プレスリリース]
    http://onlinelibrary.wiley.com/doi/10.1111/pbi.12535/full
    Ohama N, Kusakabe K, Mizoi J, Zhao H, Kidokoro S, Koizumi S, Takahashi F, Ishida T, Yanagisawa S, Shinozaki K, and *Yamaguchi-Shinozaki K. (2016) The transcriptional cascade in the heat stress response of Arabidopsis is strictly regulated at the level of transcription factor expression. Plant Cell, 28, 181-201.[プレスリリース]
    http://www.plantcell.org/content/28/1/181
    In Briefで紹介されました。
    *Ito H., Kim JM, Matsunaga W, Saze H, Matsui A, Endo TA, Harukawa Y, Takagi H, Yaegashi H, Masuta Y, Masuda S, Ishida J, Tanaka M, Takahashi S, Morosawa T, Toyoda T, Kakutani T, Kato A, Seki M. (2016) A stress-activated transposon in Arabidopsis induces transgenerational abscisic acid insensitivity. Sci. Rep., 6, 23181 (12 pages).
    http://www.nature.com/articles/srep23181
    Masuda S, Nozawa K, Matsunaga W, Masuta Y, Kawabe A, Kato A, and *Ito H. (2016) Characterization of a heat-activated retrotransposon in natural accessions of Arabidopsis thaliana. Genes Genet. Syst., 91, 293-299.
    https://www.jstage.jst.go.jp/article/ggs/91/6/91_16-00045/_article
    総説論文
    #Ohama N, #Sato H, Shinozaki K, and *Yamaguchi-Shinozaki K. (2016) Transcriptional regulatory network of plant heat stress response. Trends Plant Sci., 22, 53-65.
    http://www.sciencedirect.com/science/article/pii/S1360138516301261
    プレスリリース
    高温で働く遺伝子スイッチがデザイン可能に - 目的の遺伝子発現を温度でコントロール -(2016年11月17日)
    https://www.jircas.go.jp/ja/release/2016/press08
    イネの高温ストレス耐性を向上する方法の開発 - 温暖化や熱波による農作物の収量低下を防ぐ技術応用に期待 -(2016年2月4日)
    http://www.a.u-tokyo.ac.jp/topics/2016/20160204-1.html
    植物の高温に対する初期応答のメカニズムを解明 - 作物の高温ストレス耐性を向上させる技術開発への貢献に期待 -(2016年1月5日)
    http://www.a.u-tokyo.ac.jp/topics/2016/20160105-1.html
    新聞ネット記事・テレビ報道
    TBSテレビ「未来の起源」出演(2016年4月17日)
    植物の高温ストレスに対する感知応答メカニズムについて研究成果を話しました。
    日経バイオテク(2016年2月18日)植物の高温ストレス耐性を高める新遺伝子戦略
  • -2015年-
    原著論文
    Takasaki H, Maruyama K, Takahashi F, Fujita M, Yoshida T, Nakashima K, Myouga F, Toyooka K, *Yamaguchi-Shinozaki K, and *Shinozaki K. (2015) SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence. Plant J., 84, 1114-1123.[プレスリリース]
    http://onlinelibrary.wiley.com/doi/10.1111/tpj.13067/full
    Shida T, Fukuda A, Saito T, Ito H, and *Kato A. (2015) AtRBP1, which encodes an RNA-binding protein containing RNA-recognition motifs, regulates root growth in Arabidopsis thaliana. Plant Physiol. Bioch., 92, 62-70.
    http://www.sciencedirect.com/science/article/pii/S0981942815300103
    Matsunaga W, Ohama N, Tanabe N, Masuta Y, Masuda S, Mitani-Umeno N, *Yamaguchi-Shinozaki K, Ma JF, Kato A, and *Ito H. (2015) A small RNA mediated regulation of a stress-activated retrotransposon and the tissue specific transposition during the reproductive period in Arabidopsis. Front. Plant Sci., 6, 48 (12 pages).
    https://www.frontiersin.org/articles/10.3389/fpls.2015.00048/full
    総説論文
    Yoshida T, Mogami J, and *Yamaguchi-Shinozaki K (2015) Omics approaches toward defining the comprehensive abscisic acid signaling network in plants.
    Plant Cell Physiol., 56, 1043-1052.
    https://academic.oup.com/pcp/article/56/6/1043/1926357
    日本語著書・解説
    佐藤輝、篠崎和子 (2015) 植物の乾燥・高温応答の解明と再生作物の開発に向けて、
    Bio Industry、32(12) 25-31.
    大濱直彦、篠崎和子 (2015) 高温環境を生き抜くための植物の転写制御機構、
    化学と生物、53(10) 696-702.
    https://katosei.jsbba.or.jp/index.php?aid=459
    プレスリリース
    長期の乾燥による葉の黄化防止に関わる遺伝子を発見 - 作物の黄化制御技術の開発に応用 -(2015年11月27日)
    http://www.a.u-tokyo.ac.jp/topics/2015/20151127-1.html
    新聞ネット記事・テレビ報道
    日本農業新聞(2015年12月15日)干ばつ時でも植物の黄化抑制
    化学工業日報(2015年12月7日)乾燥による葉の黄化制御 理研が関与遺伝子発見
    日経電子版(2015年11月27日)理研と東大、長期の乾燥による葉の黄化防止に関わる遺伝子のメカニズムを解明 長期の乾燥による葉の黄化防止に関わる遺伝子を発見 -作物の黄化制御技術の開発に応用-

角谷班

  • -2017年-
    原著論文
    *#Hosaka, A., #Saito, R., Takashima, K., Sasaki, T., Fu, Y., Kawabe, A., Ito, T., Toyoda, A., Fujiyama, A., Tarutani, Y., and *Kakutani, T. (2017) Evolution of sequence-specific anti-silencing systems in Arabidopsis. Nature Commun., 8, 2161 (10 pages).
    https://www.nature.com/articles/s41467-017-02150-7
    *Inagaki, S., Takahashi, M., Hosaka, A., Ito, T., Toyoda, A., Fujiyama, A., Tarutani, Y., and *Kakutani, T. (2017) Gene-body chromatin modification dynamics mediate epigenome differentiation in Arabidopsis. EMBO J., 36, 970-980.
    http://emboj.embopress.org/content/36/8/970.full
  • -2015年-
    原著論文
    *#Ito, T., #Tarutani, Y., #To, T. K., Kassam, M., Duvernois-Berthet, E., Cortijo, S., Takashima, K., Saze, H., Toyoda, A., Fujiyama, A., Colot, V., and *Kakutani, T. (2015) Genome-wide negative feedback drives transgenerational DNA methylation dynamics in Arabidopsis. PLoS Genet., 11, e1005154 (26 pages).
    http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005154
    総説論文
    #To, T. K., #Saze, H., and *Kakutani, T. (2015) DNA methylation within transcribed regions. Plant Physiol., 168, 1219-1225.
    http://www.plantphysiol.org/content/168/4/1219

白須班

  • -2018年-
    原著論文
    Wakatake, T., Yoshida, S., and Shirasu, K. (2018) Induced cell fate transitions at multiple cell layers configure haustorium development in parasitic plants. Development, in press. [ハイライト] [インタビュー]
    http://dev.biologists.org/content/145/14/dev164848
    Kadota, Y., Liebrand, T. W. H., Goto, Y., Sklenar, J., Derbyshire, P., Menke, F. L. H., Torres, M. A., Molina, A., Zipfel, C., *Coaker, G., and *Shirasu, K. (2018) Quantitative phosphoproteomic analysis reveals common regulatory mechanisms between effector‐ and PAMP‐triggered immunity in plants. New Phytol., 221, 2160-2175.
    https://doi.org/10.1111/nph.15523
    Mutuku, J. M., Cui, S., Hori, C., Takeda, Y., Tobimatsu, Y., Nakabayashi, R., Mori, T., Saito, K., Demura, T., Umezawa, T., Yoshida, S., and *Shirasu, K. (2018) The structural integrity of lignin is crucial for resistance against Striga hermonthica parasitism in rice. Plant Physiol., 179, 1796-1809.
    https://doi.org/10.1104/pp.18.01133
    *Asai, S., Furzer, O. J., Cevik, V., Kim, D. S., Ishaque, N., Goritschnig, S., Staskawicz, B. J., Shirasu, K., and *Jones, J. D. G. (2018) A downy mildew effector evades recognition by polymorphism of expression and subcellular localization. Nature Commun., 9, 5192 (11 pages). [プレスリリース]
    https://www.nature.com/articles/s41467-018-07469-3
    *Noutoshi, Y. and *Shirasu, K. (2018) A high-throughput chemical screening method for inhibitors and potentiators of hypersensitive cell death using suspension cell culture of Arabidopsis thaliana. Methods Mol. Biol., 1795, 39-47.
    https://link.springer.com/protocol/10.1007%2F978-1-4939-7874-8_4
    *Ichihashi, Y., Kusano, M., Kobayashi, M., Suetsugu, K., Yoshida, S., Wakatake, T., Kumaishi, K., Shibata, A., Saito, K., and *Shirasu, K. (2018) Transcriptomic and metabolomic reprogramming from roots to haustoria in the parasitic plant, Thesium chinense. Plant Cell Physiol., 59, 729-738.
    https://academic.oup.com/pcp/advance-article/doi/10.1093/pcp/pcx200/4769293
    Sato, K., Kadota, Y., Gan, P., Bino, T., Uehara, T., Yamaguchi, K., Ichihashi, I., Maki, N., Iwahori, H., Suzuki, T., *Shigenobu, S., and *Shirasu, K. (2018) High-quality genome sequence of the root-knot nematode Meloidogyne arenaria genotype A2-O. Genome Announc., 6, e00519-18 (2 pages).
    https://mra.asm.org/content/6/26/e00519-18
    Cui, S., Wada, S., Tobimatsu, Y., Takeda, Y., Saucet, S. B., Takano, T., Umezawa, T., Shirasu, K., and *Yoshida, S. (2018) Host lignin composition affects haustorium induction in the parasitic plants Phtheirospermum japonicum and Striga hermonthica. New Phytol., 218, 710-723.
    https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.15033
    *Spallek, T., Gan, P., Kadota, Y., and *Shirasu, K. (2018) Same tune, different song - Cytokinins as virulence factors in plant-pathogen interactions? Curr. Opin. Plant Biol., 44, 82-87.
    https://www.sciencedirect.com/science/article/pii/S1369526617301966
    Uemura, A., Yamaguchi, N, Xu, Y., Wee, W., Ichihashi, Y., Suzuki, T., Shibata, A., Shirasu, K., and *Ito, T. (2018) Regulation of floral meristem activity through the interaction of AGAMOUS, SUPERMAN, and CLAVATA3 in Arabidopsis. Plant Reprod., 31, 89-105.
    https://link.springer.com/article/10.1007/s00497-017-0315-0
    *Ichihashi, Y., Fukushima, A., Shibata, A., and Shirasu, K. (2018) High impact gene discovery: simple strand-specific mRNA library construction and differential regulatory analysis based on gene co-expression network. Methods Mol. Biol., 1830, 163-189.
    https://link.springer.com/protocol/10.1007/978-1-4939-8657-6_11
    日本語著書・解説
    白須賢(2018)比較ゲノミクスをベースにしたイチゴ炭疽病Colletotrichum gloeosporioides種複合体の解析、植物防疫、72、18-21.
    吉田聡子、白須賢(2018)寄生植物の宿主認識と感染機構、日植病報、84、267-274.
    プレスリリース
    植物病原菌の巧妙な認識回避機構 -植物と病原菌の攻防における共進化の一端を解明-(2018年12月5日)
    http://www.riken.jp/pr/press/2018/20181205_1/
  • -2017年-
    原著論文
    Uemura, A., *Yamaguchi, N, Xu, Y., Wee, W-Y., Ichihashi, Y., Suzuki, T., Shibata, A., Shirasu, K., and Ito, T. (2017) Regulation of floral meristem activity through the interaction of AGAMOUS, SUPERMAN, and CLAVATA3 in Arabidopsis. Plant Reproduction, 31, 89-105.
    https://link.springer.com/article/10.1007%2Fs00497-017-0315-0
    Ishida, J. K., Yoshida, S., and *Shirasu, K. (2017) Quinone oxidoreductase 2 is involved in haustorium development of the parasitic plant Phtheirospermum japonicum. Plant Signal. Behav., 12, e1319029 (4 pages) .
    http://www.tandfonline.com/doi/full/10.1080/15592324.2017.1319029
    Xu, B., Cheval, C., Laohavisit, A., Chiasson, D., Hocking, B., Olsson, T., *Shirasu, K., Faulkner, C., Gilliham, M. (2017) A calmodulin-like protein regulates plasmodesmal closure during bacterial immune responses. New Phytologist, 215, 77-84.
    http://onlinelibrary.wiley.com/doi/10.1111/nph.14599/full
    Ishida, J. K., Yoshida, S., *Shirasu, K. (2017) Haustorium induction assay of the parasitic plant Phtheirospermum japonicum. Bio-protocol, 7, e2260 (9 pages).
    http://www.bio-protocol.org/e2260
    Gan, P., Nakata, N., Suzuki, T., *Shirasu, K. (2017) Markers to distinguish different species of anthracnose fungi identify Colletotrichum fructicola as the predominant virulent species in strawberry plants in the Chiba prefecture of Japan. J. Gen. Plant Path., 83, 14-22.
    https://link.springer.com/article/10.1007/s10327-016-0689-0?wt_mc=Internal.Event.1.SEM.ArticleAuthorAssignedToIssue
    Gan, P., Narusaka, M., Tsushima, A., Narusaka, Y., Takano, Y. and Shirasu, K. (2017) Draft genome assembly of Colletotrichum chlorophyti, a pathogen of herbaceous plants. Genome Announcements, 5, e01733-16.
    http://genomea.asm.org/content/5/10/e01733-16.full?sid=4e6783c0-0cbc-4f43-99a2-c9b89b846f40
    #Spallek, T., #Melnyk, C., W., Wakatake, T., Zhang, J., Sakamoto, Y., Kiba, T., Yoshida, S., Matsunaga, S., Sakakibara, H. and *Shirasu, K. (2017) Interspecies hormonal control of host root morphology by parasitic plants. Proc. Natl. Acad. Sci. U.S.A., 114, 5283-5288. [プレスリリース]
    http://www.pnas.org/content/114/20/5283
    総説論文
    *López-Ráez, J. A., Shirasu, K., Foo, E. (2017) Strigolactones in plant interactions with beneficial and detrimental organisms: the yin and yang. Trends in Plant Sci., 22, 527-537.
    http://www.cell.com/trends/plant-science/abstract/S1360-1385(17)30062-6
    プレスリリース
    寄生植物は植物ホルモンを使い宿主を太らせる - 植物間のサイトカイニン輸送を発見 - (2017年5月2日) http://www.a.u-tokyo.ac.jp/topics/2016/20160204-1.html
    新聞ネット記事・テレビ報道
    毎日新聞(2017年5月10日)自分の成長ホルモン注入 宿主を「育成」
    化学工業日報(2017年5月2日)ホルモンで宿主を操作 寄生植物の機序発見
  • -2016年-
    原著論文
    Yamada, K., Yamaguchi, K., Shirakawa, T., Nakagami, H., Mine, A., Ishikawa, K., Fujiwara, M., Narusaka, M., Narusaka, Y., Ichimura, K., Kobayashi, Y., Matsui, H., Nomura, Y., Nomoto, M., Tada, Y., Fukao, Y., Fukamizo, T., Tsuda, K., Shirasu, K., Shibuya, N., and *Kawasaki, T. (2016) The Arabidopsis CERK1-associated kinase PBL27 connects chitin perception to MAPK activation. EMBO J., 35, 2468-2483.
    http://emboj.embopress.org/content/35/22/2468
    Saucet, S. B. and Shirasu, K. (2016) Molecular parasitic plant-host interactions. PLoS Pathog., 12, e1005978 (6 pages).
    http://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1005978
    Ishida, J. K., Wakatake, T., Yoshida, S., Takebayashi, Y., Kasahara, H., Wafula, E., dePamphilis, C. W., Shigetou N., Shirasu, K. (2016) Local auxin biosynthesis mediated by a YUCCA flavin monooxygenase regulates the haustorium development in the parasitic plant Phtheirospermum japonicum. Plant Cell, 28, 1795-1814.
    http://www.plantcell.org/content/28/8/1795
    Gan, P., Narusaka, M., Kumakura, N., Tsushima, A., Takano, Y., Narusaka, Y., Shirasu, K. (2016) Genus-wide comparative genome analyses of Colletotrichum species reveal specific gene family losses and gains during adaptation to specific infection lifestyles. Genome Biol. Evol., 8, 1467-1481.
    https://academic.oup.com/gbe/article/8/5/1467/2939589
    Cui, S., Wakatake, T., Hashimoto, K., Saucet, S.B., Toyooka, K., Yoshida, S. and Shirasu, K. (2016) Haustorial hairs are specialized root hairs that support parasitism in the facultative parasitic plant, Phtheirospermum japonicum. Plant Physiol., 170, 1492-1503.
    http://www.plantphysiol.org/content/170/3/1492.full
    総説論文
    Yoshida, S., Cui, S., Ichihashi, Y., Shirasu, K. (2016) The haustorium, a specialized invasive organ in parasitic plants. Annu. Rev. Plant Biol., 67, 643-667.
    http://www.annualreviews.org/doi/pdf/10.1146/annurev-arplant-043015-111702
    日本語著書・解説
    若竹崇雅、吉田聡子、白須賢 (2016) 根寄生植物の寄生メカニズム ~ ゲノム解読とモデル実験系の確立で農業被害の撲滅に道、生物の科学、遺伝、70 (4) 289-293.
    新聞ネット記事・テレビ報道
    Plant Cell (2016年12月15日)「Best of 2016: Top Topics in The Plant Cell journal」
    http://blog.aspb.org/2016/12/15/best-of-2016-top-topics-in-the-plant-cell-journal/
    RIKEN RESEARCH (2016年10月14日) 「Pinning down parasitic plants - A key player in the infection mechanism of parasitic plants has been identified」
    http://www.riken.jp/en/research/rikenresearch/highlights/8268/
    科学新聞 (2016年7月29日) 「オーキシンの局所的生合成が重要 ~ 寄生植物侵入器官発生解明へ一歩」
    日経産業新聞 (2016年7月12日)「雑草寄生の仕組み解明 ~ 理研、農作物被害抑制の光」
    理化学研究所 環境資源科学研究センター ニュース (2016年4月15日) 科学技術の「美」パネル展 優秀作品に選出
    http://www.csrs.riken.jp/jp/news/160419/index.html
    Plant Science Today (2016年1月7日) 「“Characterization of parasitic plant mutants”, accessible research for undergraduate readers」
    http://blog.aspb.org/2016/01/07/characterization-of-parasitic-plant-mutants-accessible-research-for-undergraduate-readers/
  • -2015年-
    原著論文
    Adachi, H., Nakano, T., Miyagawa., N., Ishihama, N., Yoshioka, M., Katou, Y., Yaeno, T., Shirasu, K., and Yoshioka, H. (2015) WRKY transcription factors phosphorylated by MAPK regulate a plant immune NADPH oxidase in Nicotiana benthamiana. Plant Cell, 27, 2645-2663.
    http://www.plantcell.org/content/27/9/2645
    Conn, C. E., Bythell-Douglas, R., Neumann, D., Yoshida, S., Whittington, B., Westwood, J. H., Shirasu, K., Bond, C. S., Dyer, K. A., and Nelson, D. C. (2015) Convergent evolution of strigolactone perception enabled host detection in parasitic plants. Science, 349, 540-543.[プレスリリース]
    http://www.sciencemag.org/content/349/6247/540.full
    Mutuku, J. M., Yoshida, S., Shimizu, T., Ichihashi, Y., Wakatake., T., Seo, M., Takahashi., A., and Shirasu, K. The WRKY45-dependent signaling pathway is required for resistance against Striga hermonthica Parasitism. (2015) Plant Physiol, 168, 1152-1163.
    http://www.plantphysiol.org/content/168/3/1152
    総説論文
    Asai, S. and Shirasu, K. (2015) Plant cells under siege: plant immune system versus pathogen effectors. Curr. Opin. Plant Biol., 28, 1-8.
    http://www.sciencedirect.com/science/article/pii/S1369526615001284
    Ichihashi, Y., Mutuku, J. M., Yoshida, S., and Shirasu, K. (2015) Transcriptomics exposes the uniqueness of parasitic plants. Brief. Funct. Genomics, 14, 275-282.
    https://academic.oup.com/bfg/article/14/4/275/202385
    Kadota, Y., Shirasu, K., and Zipfel, C. (2015) Regulation of the NADPH oxidase RBOHD during plant immunity. Plant Cell Physiol., 56, 1472-1480.
    https://academic.oup.com/pcp/article/56/8/1472/1845322
    英語著書
    Mutuku, J. M., Spallek, T., and Shirasu, K. Striga: physiology, effects, and genomics. (2015) YEARBOOK OF SCIENCE & TECHNOLOGY, 312-314.
    プレスリリース
    寄生植物の発芽誘導の仕組みを解明(2015年7月31日)
    http://www.riken.jp/pr/press/2015/20150731_1/
    新聞ネット記事・テレビ報道
    化学工業日報 (2015年8月6日) 寄生植物の発芽誘導受容体 理研 ― ジョージア大が発見